back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Cht4 and Ovgp1

DIOPT Version :9

Sequence 1:	NP_524962.2	Gene:	Cht4 / 49815	FlyBaseID:	FBgn0022700	Length:	462	Species:	Drosophila melanogaster
Sequence 2:	NP_031722.1	Gene:	Ovgp1 / 12659	MGIID:	106661	Length:	721	Species:	Mus musculus

Alignment Length:	488	Identity:	153/488 - (31%)
Similarity:	228/488 - (46%)	Gaps:	114/488 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 LAALCLCLGQVASSEKLLNCYWGTWANYRPGDGKFTPSDIDPSLCTHISYTFFGISDAGEFKSLD 73
            ||.|.|.:.....:...|.||:..||:.|||.....|.|:||.||||:.:.|..:|:
Mouse     7 LAGLVLLMKHSDGTAYKLVCYFTNWAHSRPGPASIMPHDLDPFLCTHLIFAFASMSN-------- 63

  Fly    74 TWLDMDDGLGFISQTIA---------------LKQRNPNLKILAVVGGWNEGSTKYSAMAADPAK 123
                        :|.:|               ||:||..||.|..:||||.|:::::||.:..|.
Mouse    64 ------------NQIVAKNLQDENVLYPEFNKLKERNRELKTLLSIGGWNFGTSRFTAMLSTLAN 116

  Fly   124 RATFVSTSLAFIQQYSFDGLDLDWEYPGQRGGSEADRENFVTLLREIKETYDQYG-------LEL 181
            |..|:.:.::|::.:.||||||.:.|||.||....||.||:.|:.|::..:::..       |.|
Mouse   117 REKFIDSVISFLRIHGFDGLDLFFLYPGLRGSPPHDRWNFLFLIEELQFAFEREALLTQHPRLLL 181

  Fly   182 GIAVGASEKSASISYDIPAISQHLTFINVMTYDFHMALDGYLGLNAP---LPEVAES----IDYW 239
            ..||.........|||...:.:.|.||||::||.|.:.:.:.|.|:|   |||.::|    ::||
Mouse   182 SAAVSGIPSIIHTSYDALLLGRRLDFINVLSYDLHGSWEKFTGHNSPLFSLPEDSKSSAYAMNYW 246

  Fly   240 LSHGAPAEKLILGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEIC------LN 298
            ...|.||:|||:|...||.::.:...|:|....|.:||.:.|.||::.|||.|:|:|      ..
Mouse   247 RKLGTPADKLIMGFPTYGRNFYLLKESKNGLQTASMGPASPGKYTKQAGFLAYYEVCSFVQRAKK 311

  Fly   299 NWQTVFDQENGAPYAFQGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDDFRG-LCGES-Y 361
            :|   .|.:. .||||:|.:|:|||:..|...|...|:..:.||||:|:::.||.|| .||.. :
Mouse   312 HW---IDYQY-VPYAFKGKEWLGYDDTISFSYKAMYVKREHFGGAMVWTLDMDDVRGTFCGNGPF 372

  Fly   362 PLLKTMNRALGREVS--------------GGSGGGGGG-----------------GGE------- 388
            ||:..:|..|.:..|              ..||.|...                 |||
Mouse   373 PLVHILNELLVQTESNSTPLPQFWFTSSVNASGPGSENTALTEVLTTDTIKILPPGGEAMTTEVH 437

  Fly   389 ------------GSVTPAPTAAPTSSPTPAPTP 409
                        |||||..||:|...   |.||
Mouse   438 RRYENMTTVPSDGSVTPGGTASPRKH---AVTP 467

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.