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Protein Alignment Cht4 and Chil4

DIOPT Version :9

Sequence 1:	NP_524962.2	Gene:	Cht4 / 49815	FlyBaseID:	FBgn0022700	Length:	462	Species:	Drosophila melanogaster
Sequence 2:	NP_660108.2	Gene:	Chil4 / 104183	MGIID:	1341098	Length:	402	Species:	Mus musculus

Alignment Length:	405	Identity:	154/405 - (38%)
Similarity:	221/405 - (54%)	Gaps:	55/405 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 KLVSIWALAALCLCLGQVASSEKLLNCYWGTWANYRPGDGKFTPSDIDPSLCTHISYTFFGI--- 63
            ||:.:..||.|...  |:.||.:|: ||:.:||..||.:|.|.|.:|||.||||:.|.|.|:
Mouse     3 KLILVTGLAILLNV--QLGSSYQLM-CYYTSWAKDRPTEGSFKPGNIDPCLCTHLIYAFAGMKNN 64

  Fly    64 -------SDAGEFKSLDTWLDMDDGLGFISQTIALKQRNPNLKILAVVGGWNEGSTKYSAMAADP 121
                   .|..::::|:                .||.||..||.|..:|||..|...:|:|.:.|
Mouse    65 EITYLSEQDLRDYEALN----------------GLKDRNTELKTLLAIGGWKFGPAPFSSMVSTP 113

  Fly   122 AKRATFVSTSLAFIQQYSFDGLDLDWEYPGQRGGSEADRENFVTLLREIKETYDQYG-------- 178
            ..|.||:.:.:.|::||:||||:|||:|||.||....|:..|..|::|:::.:::..
Mouse   114 QNRQTFIKSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVQEMRKAFEEESTLNHIPRL 178

  Fly   179 LELGIAVGASEKSASISYDIPAISQHLTFINVMTYDFHMALDGYLGLNAPL---P-EVAESID-- 237
            |......|..:...| .|.||.:||.|.:|.|||||.|...:||.|.|:||   | ::.:|.|
Mouse   179 LLTSTGAGFIDVIKS-GYKIPELSQSLDYIQVMTYDLHDPKNGYTGENSPLYKSPYDIGKSADLN 242

  Fly   238 ------YWLSHGAPAEKLILGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEIC 296
                  ||..|||.:||||:|...|||::.:||.|:|..|...:..|..|.||.|.|.|.|.|||
Mouse   243 VDSIITYWKDHGAASEKLIVGFPAYGHTFILSDPSKNGIGDPTVSAGPPGKYTNEQGLLAYFEIC 307

  Fly   297 --LNNWQT-VFDQENGAPYAFQGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDDFRG-LC 357
              ||...| :||.....|||:.|::|:||||..|.:||.|.::..|||||::|.::.|||.| .|
Mouse   308 TFLNEGATEIFDATQEVPYAYLGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFC 372

  Fly   358 GES-YPLLKTMNRAL 371
            .:. :||..|:.|.|
Mouse   373 HQGRFPLTTTLKRDL 387

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.