DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4H1 and H05C05.1

DIOPT Version :9

Sequence 1:NP_001285330.1 Gene:eIF4H1 / 49809 FlyBaseID:FBgn0262734 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001367918.1 Gene:H05C05.1 / 259329 WormBaseID:WBGene00019157 Length:903 Species:Caenorhabditis elegans


Alignment Length:390 Identity:96/390 - (24%)
Similarity:142/390 - (36%) Gaps:106/390 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RASKQLPTEPPFIAFVGNLPQGLVQGDVIKIF-QDFEVKYVRLVKDRETDQFKGFCYVEFETLDN 81
            |..:.:||||||...:.|:....|:.::|..| .:..:|.|.:.|:....:|      |:.|.|.
 Worm   137 RGRRNIPTEPPFRVQITNISSQHVEEELIYYFGGESHIKRVDIRKEDGNAEF------EYFTRDG 195

  Fly    82 LERAL-----ECDGRIKLDDLSAPLRIDIADRRKNDRPGGGVGGGNGGMTRGDGGRDGFQKRGPP 141
            |..||     |..||:        |::.:...|::             :.|.. .|...|:.|.|
 Worm   196 LLLALKKQDVEFKGRV--------LKVFVRQNRES-------------VARVT-SRHSQQEYGRP 238

  Fly   142 RQG--------GSSQSYSR---GGPGTGGGGREGGGGSGNRGDSRGSYIDSYGGHNDRSRGVGGS 195
            .:.        .|||:|.|   ....:....:.|....|||.:..|:.  ..||.:||       
 Worm   239 YESNDSHFSGKSSSQNYRRSHYNSQNSLNSDKHGRYDKGNRSNHYGTM--PAGGFHDR------- 294

  Fly   196 GAGSGGGMNRGYNDRPANRGRYGSFNNDDRPFERNQDRDRGQ-----REGSYGNQSRDGDRYNNF 255
               .|||..||.||...|..  |||.....|   |.||....     ..|:.|...|.|...:|.
 Worm   295 ---RGGGSYRGSNDCRFNNN--GSFRAPRNP---NYDRQNSSGRDDYHHGNGGPLQRSGSYQHNH 351

  Fly   256 NRH--RDRERTHYNPNQQSERPSGGMTGLGGGSGGSGGLGVGGGS-SMGAIDNFRHFKKPISRII 317
            |..  :|..|.:.|.|..|..         .|.||.|.:.....: |....:|:..|.:..||: 
 Worm   352 NHSNTKDYGRQYSNHNHYSNY---------HGGGGPGSISARSRTESHSTTNNYDAFSRTSSRM- 406

  Fly   318 SNMCQSRVSQLAVPRTNDNERPRLQLKPRTIAAPINAVAETKQSASIFGNAKP--REEKLKELQQ 380
                     .||...|.: |.|:.:              .|...|:.||:|||  .|.:|.||::
 Worm   407 ---------SLAATGTVE-ETPQRK--------------STGGGANPFGDAKPVDTETRLLELEK 447

  Fly   381  380
             Worm   448  447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4H1NP_001285330.1 RRM <19..>139 CDD:223796 28/125 (22%)
RRM_eIF4H 28..106 CDD:240847 20/83 (24%)
H05C05.1NP_001367918.1 RRM_SF 143..220 CDD:418427 24/90 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156052
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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