DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4H1 and sce3

DIOPT Version :10

Sequence 1:NP_001285330.1 Gene:eIF4H1 / 49809 FlyBaseID:FBgn0262734 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_595728.1 Gene:sce3 / 2540528 PomBaseID:SPBC18H10.04C Length:388 Species:Schizosaccharomyces pombe


Alignment Length:410 Identity:88/410 - (21%)
Similarity:117/410 - (28%) Gaps:193/410 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YEHARS----------GFGGDRASKQLPTEPPFIAFVGNLPQGLVQGDVIKIFQDFEVKYVRLVK 61
            :|..||          |.|..|.:..:|:||||.|.||||...|.:.|:...|.: .|..:|||.
pombe    62 FESVRSPPESRREGGMGSGYQRDAIPIPSEPPFTAHVGNLSFDLTENDLGDFFGE-GVTSIRLVI 125

  Fly    62 DRETDQFKGFCYVEFETLDNLERALECDGRIKLDDLSAPLRIDIADRRKNDRPGGGVGGGNGGMT 126
            |..|::.:||.||||||.|.|..||...|.   |.:..|:||.:|:.|::             ..
pombe   126 DPLTERSRGFGYVEFETADTLSAALALSGE---DLMGRPVRITVAEPRRS-------------FA 174

  Fly   127 RGDGGRDGFQKRG--PPRQGGSSQSYSRGGPGTGGGGREGGGGSGNRGDSRGSYIDSYGGHNDRS 189
            |.:.....:.:||  ||.:...|.                                         
pombe   175 REERSTGDWVRRGPLPPAEPAESP----------------------------------------- 198

  Fly   190 RGVGGSGAGSGGGMNRGYNDRPANRGRYGSFNNDDRPFERNQDRDRGQREGSYGNQSRDGDRYNN 254
                             :..|..|.||:           |:..||...|.               
pombe   199 -----------------FGKRRTNSGRF-----------RDPARDPSDRV--------------- 220

  Fly   255 FNRHRDRERTHYNPNQQSERPSGGMTGLGGGSGGSGGLGVGGGSSMGAIDNFRHFKKPISRIISN 319
              |...||.....|                                                   
pombe   221 --REEPREWVRRGP--------------------------------------------------- 232

  Fly   320 MCQSRVSQLAVPRTNDNERPRLQLKPR------TIAAP-INAVAETKQSASIFGNAKP------- 370
                      :|....:|||||.||||      |.|.| ......:|.....||.|||       
pombe   233 ----------LPPRESSERPRLNLKPRSSSNVNTEATPSATTTTSSKPKRDPFGGAKPVDNTSVL 287

  Fly   371 --REEKLKELQQNVNHNGDN 388
              .||||.:..|:.... ||
pombe   288 QRVEEKLAKRTQSFRRE-DN 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4H1NP_001285330.1 RRM_eIF4H 24..110 CDD:409835 37/85 (44%)
sce3NP_595728.1 RRM_eIF4B 92..171 CDD:409836 35/82 (43%)

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