DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4H1 and EEED8.12

DIOPT Version :10

Sequence 1:NP_001285330.1 Gene:eIF4H1 / 49809 FlyBaseID:FBgn0262734 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_495021.1 Gene:EEED8.12 / 173922 WormBaseID:WBGene00017140 Length:197 Species:Caenorhabditis elegans


Alignment Length:155 Identity:44/155 - (28%)
Similarity:67/155 - (43%) Gaps:18/155 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PTEPPFIA------FVGNLPQGLVQGDVIKIFQDF-EVKYVRLVKDRETDQFKGFCYVEFETLDN 81
            |||....|      |:||:.......:|.:.|:.. .:....:.||:.|.:.|.|.|:||:...:
 Worm    50 PTEEEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSS 114

  Fly    82 LERALECDGRIKLDDLSAPLRIDIADRRKNDRPGGGVGGGNGGMTRGDGGRDGFQKRGPPRQGGS 146
            :|.||..:|.:   ..|.|:   :...::.:.|  |:|.|..|.:||..||.....||.|   |.
 Worm   115 IENALVMNGSL---FRSRPI---VVTAKRTNIP--GMGHGVRGSSRGTFGRGRGAARGAP---GR 168

  Fly   147 SQSYSRGGPGTGGGGREGGGGSGNR 171
            .|:.........|..|.|.||.|.|
 Worm   169 QQTVVVKYVYVNGPNRGGRGGRGRR 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4H1NP_001285330.1 RRM_eIF4H 24..110 CDD:409835 23/92 (25%)
EEED8.12NP_495021.1 RRM_II_PABPs 62..134 CDD:409747 19/77 (25%)

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