DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpinb2

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_067728.1 Gene:Serpinb2 / 60325 RGDID:621823 Length:416 Species:Rattus norvegicus


Alignment Length:415 Identity:129/415 - (31%)
Similarity:208/415 - (50%) Gaps:60/415 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALG---------- 65
            |..|....|:|.|    |::.||:.:||.||.:.|::||:||:.:|.:::...|.          
  Rat     9 TMFALNLLKQIEQ----SNSTQNIFISPWSISSTLAIVFLGAQANTEEQMAKVLNFDKIGSYDLT 69

  Fly    66 -------------------------LPSEDKEAVAARYGALLNDLQGQEEGP-ILKLANRIYVND 104
                                     |.::.::.:.:.:.:|.:.:.....|. :|:.||:::...
  Rat    70 PGNPENFHGCDFAQHIQRDNYPVAILQAQARDKIHSAFSSLSSTINTPRLGDYLLESANKLFGEK 134

  Fly   105 QYSLNQNYNLAVREPFKSEAESIS-LTNGPVAAERINQWVLDQTSGKIKGMIDPGSMTSDVKALL 168
            .....:.|....::.:.:|.|::. |.....|.::||.||..||.|:|..::..||:..|.|.:|
  Rat   135 SARFKEEYIQRCKKYYSTEPEAVDFLECANEARKKINSWVKTQTKGEIPNLLPEGSVDEDTKMVL 199

  Fly   169 VNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGTFRANYFRDLDAQVIELPYLNSNL 233
            ||.|||||:|::.|.........|:|..|:|.|||||.........|.:||..|::||||: .|:
  Rat   200 VNTIYFKGRWKTPFQKRLNGLYPFRVNLNESKPVQMMYLREKLNIGYIKDLKTQILELPYI-GNI 263

  Fly   234 SMTIFLPREVE----GLSALEEKIVGF--ARPLVAKE------VYLKLPKFKIEFRDELKETLEK 286
            ||.:.||.|:|    ||..||.:| .|  ....::||      |.:.:||||:....|||..|::
  Rat   264 SMFLLLPDEIEDSSTGLEMLEREI-NFDNFNKWISKETLDEDDVLVYIPKFKLAQNYELKPILQR 327

  Fly   287 LGIRELFT-DKSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAAGATSVAVTNRAGF-STFLMA 349
            :|:.:.|. .|:|.||: ::.:...:|:|.|:|.::|||||..|||.|...:|.|.|. ....:|
  Rat   328 MGMEDAFNKGKADFSGM-SESNDLFLSEVFHQATVDVNEEGTVAAGGTGAVMTGRTGHGGPQFVA 391

  Fly   350 DHPFAFVIRD--ANTIYFQGRVVSP 372
            ||||.|.|.:  ..||.|.||..||
  Rat   392 DHPFLFFIMNNITRTILFVGRFSSP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 126/412 (31%)
Serpinb2NP_067728.1 serpinB2_PAI-2 2..416 CDD:381029 127/413 (31%)

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