DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and serpina3m

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001025693.1 Gene:serpina3m / 595085 XenbaseID:XB-GENE-6453454 Length:413 Species:Xenopus tropicalis


Alignment Length:373 Identity:126/373 - (33%)
Similarity:199/373 - (53%) Gaps:29/373 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSE---DKEAV 74
            ||....||      |:...:|:..|||||.|.|:|:.:||:..|..::.::|. |.|   .:..:
 Frog    54 VASSALKE------KNSEPKNIFFSPVSISTSLAMLALGAKAETRHQILNSLA-PKETPIQEVKI 111

  Fly    75 AARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAERI 139
            ...:..||..|...::...:.:.|..:|.::....:::.......::::..|.:..|...|..:|
 Frog   112 HNAFKHLLQTLNKPKKDLKITVGNAAFVEEELKFLKSFAHEAERYYQADVFSTNFKNPKDAEIQI 176

  Fly   140 NQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQM 204
            |.:|.:||:||||.::...||  |.|.||||.|.|||:|||.|.|..||.|.|.:.....|.|:|
 Frog   177 NNYVNNQTNGKIKELVRGPSM--DTKLLLVNYILFKGEWESPFSPDFTRLSVFSIDNRTKVEVKM 239

  Fly   205 MAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLP-----REVEGLSAL-EEKIVGFARPLVAK 263
            |::||.|......:|...|::|||::..| |.:.:|     :|||  :|| ::.|:.:......|
 Frog   240 MSRMGRFDIFLDNELPCTVLKLPYIDDAL-MLLIMPELGKIQEVE--AALSKDTILRWRNSTSKK 301

  Fly   264 EVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGK--VSQVSHKAFLEVNEEG 326
            .:.|.:|||.|....:|||.|..:|:..:|:|::|.||:..|   ||  :|:|.|||.|:|:|:|
 Frog   302 FLRLYMPKFSISSSLKLKEILSDVGMSNIFSDQADFSGIVED---GKLTLSKVIHKAVLDVDEKG 363

  Fly   327 AEAAGATSVAVTNRAGFSTFLMADHPFAFVI--RDANTIYFQGRVVSP 372
            .|||..|:|.|. |.........|.||..||  :..:||.|.||:|:|
 Frog   364 TEAAAVTAVNVI-RYSLLKSQKVDRPFLVVICSKQTDTILFMGRIVNP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 125/371 (34%)
serpina3mNP_001025693.1 serpinA 43..410 CDD:381073 125/371 (34%)

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