DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dd and serpinb14

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_002665111.3 Gene:serpinb14 / 569051 ZFINID:ZDB-GENE-050506-148 Length:437 Species:Danio rerio


Alignment Length:433 Identity:136/433 - (31%)
Similarity:211/433 - (48%) Gaps:81/433 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALG--------------- 65
            |.|..:::.:|..:.:.|:..|||||.:.|:||.:||:|:||.::...||               
Zfish    10 QFSLNLFKKISGGNASGNVFYSPVSISSALAMVSLGAKGNTADQMFKVLGFNNLPKSAGATPEAH 74

  Fly    66 ------------------------------LPSEDK-----------EAVAARYGALLNDLQGQE 89
                                          :|:|.|           |.:.:.:...:::|....
Zfish    75 QSMMQQAQKPKSGVKDQHGQAMMQQTQKIDIPAELKKGSAVPGQKAEEQIHSNFNKFMSELNKPG 139

  Fly    90 EGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAE-RINQWVLDQTSGKIKG 153
            ...:|.||||:|....|...:.:....:..:::..|.:...|...||. .||.||...|..|||.
Zfish   140 APYVLSLANRLYGEQTYQFVEKFLSDAKRYYEAGLEKVDFKNKSEAARVNINTWVEKNTQEKIKD 204

  Fly   154 MIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGTFRANYFRD 218
            ::..|::.:..:.:|||||||||.||.||....|....|::..|::.||:||.|...|......:
Zfish   205 LLPSGAIDAMTRLVLVNAIYFKGNWERKFPKEATNDGQFKLNKNQTKPVKMMYQKAHFPLASIPE 269

  Fly   219 LDAQVIELPYLNSNLSMTIFLPREVE----GLSALE-----EKIVGFARPLVAK--EVYLKLPKF 272
            :::||:||||:..||||.|.||.::|    ||..||     ||::.:.:|.|.:  ||.:.||||
Zfish   270 MNSQVLELPYVGKNLSMLIILPDQIEDATTGLEKLEKALTYEKLMEWTKPEVMRQQEVQVSLPKF 334

  Fly   273 KIEFRDELKETLEKLGIRELF-TDKSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAAGATSVA 336
            |:|...::|..|..:|:.::| ..|.:|:|: :..:...:|:|.||||:||||||.|||.||...
Zfish   335 KMEQTYDMKSLLVSMGMEDVFDPQKVNLTGM-SSSNDLVLSKVIHKAFVEVNEEGTEAAAATGAI 398

  Fly   337 VTNRA-----GFSTFLMADHPFAFVIR--DANTIYFQGRVVSP 372
            :..|.     .|:    |||||.|.||  ...:|.|.||..||
Zfish   399 MMLRCIRLPQSFN----ADHPFLFFIRHNPTKSILFYGRFCSP 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 133/428 (31%)
serpinb14XP_002665111.3 SERPIN 4..437 CDD:294093 134/431 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm8430
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.830

Return to query results.
Submit another query.