DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dd and serpina7

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_021331940.1 Gene:serpina7 / 564060 ZFINID:ZDB-GENE-041010-47 Length:425 Species:Danio rerio


Alignment Length:410 Identity:111/410 - (27%)
Similarity:202/410 - (49%) Gaps:52/410 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IFLWV---TSVACQTSKEIYQ-------------------------LLSKSHTNQNLVVSPVSIE 42
            :|||:   ..|.|...:.:.|                         :.|..:.::|:..||.|:.
Zfish    21 VFLWIFGFAIVVCGNQETLQQPPISAKLPSLINMNNDFAFHLYKRLIESPDYQSKNIFFSPFSVS 85

  Fly    43 TILSMVFMGAEGSTAKELQSALGLPSE--DKEAVAARYGALLNDLQGQEEGPILKLANRIYVNDQ 105
            ..||.:.:||.|.|.::|.|.:|..|.  ..|.:...:.:||.::..:.|..| .:...:|.:|:
Zfish    86 MALSELSLGAGGDTKQQLLSGIGYNSAIFSTEEMHQLFHSLLEEIGNRTEVDI-DVGTALYASDR 149

  Fly   106 YSLNQNYNLAVREPFKSEAESISLTNGPVAAERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVN 170
            :..:..:...::|.:.|:..::.. :.....::||::|.::|.|||...:|  ::..|....|:.
Zfish   150 FKPHSKFLEDMKEFYHSDGFTVDF-SVKETVDQINKYVEEKTHGKISQAVD--NLEKDTLMFLLT 211

  Fly   171 AIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGTFRANYFRDLDAQVIELPYLNSNLSM 235
            .|||||:|:..|.|..|..|||.:....:||||||.|....:..|..:|..:|:.|.| |.:.||
Zfish   212 YIYFKGKWDKPFKPETTSESTFYIDDKTTVPVQMMHQYEHLKVYYDVELFTKVLCLDY-NDSFSM 275

  Fly   236 TIFLP---------REVEGLSALEEKIVGFARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRE 291
            .:.:|         :::| ::...:.|..:.|.:..::|.:.:||..::....||:.|:.:|:.:
Zfish   276 ILAVPDVYMKQKTMKDLE-MTVSRQHIEKWRRSVSERKVDIYVPKLSLKTSYSLKDILKGMGMTD 339

  Fly   292 LFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAAGATSVAV--TNRAGFSTFLMADHPFA 354
            :|:||:|.:|:  .:....||:|.|||.|:::|:|..||..|.|.:  |:....|. |..||||.
Zfish   340 MFSDKADFTGV--SEENIFVSKVLHKATLDIDEQGTTAAAVTGVEIRPTSYDPLSD-LKFDHPFM 401

  Fly   355 FVIRDA--NTIYFQGRVVSP 372
            ..|.|.  :.|.|.|:||:|
Zfish   402 IFITDQTNDNILFVGKVVNP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 103/392 (26%)
serpina7XP_021331940.1 alpha-1-antitrypsin_like 54..418 CDD:239011 102/372 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.