DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and serpind1

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:394 Identity:123/394 - (31%)
Similarity:192/394 - (48%) Gaps:77/394 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IYQLLSKSHT--NQNLVVSPVSIETILSMVFMGAEGSTAKELQSALG----LPSEDKEAVAARYG 79
            :|:.: |::|  :.|::::||.|.|.::.:.:|.:|....::...||    :.:..|..:...:.
 Frog   123 LYRAI-KNNTDASDNILLAPVGISTAMATISLGTKGQALDQVLFTLGFKNFINASSKYEILTLHN 186

  Fly    80 A---LLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFK--------SEAESIS----- 128
            .   |.:.|..:..|..|:..|.|||...:        .:|||||        :||:.:.     
 Frog   187 VFRKLTHRLFRRNFGYTLRSVNDIYVKKDF--------VIREPFKNNLKNYYFAEAQMVDFGSKD 243

  Fly   129 -LTNGPVAAERINQWVLDQTSGKIKGM---IDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRA 189
             ||.   |.:||.|    .|.|.||..   :||..:     .||||.|||||.||:||....|:.
 Frog   244 FLTK---ANKRIQQ----LTKGLIKEALTNVDPALL-----MLLVNCIYFKGTWENKFPVEYTQN 296

  Fly   190 STFQVTANKSVPVQMMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIV 254
            ..|::...:.|.|.||...|.|......:||..|::|||: .|:||.|.||.::.|:..||::| 
 Frog   297 MNFRLNEKELVKVPMMKTKGNFLVAADPELDCAVLQLPYV-GNISMLIVLPHKLSGMKLLEKQI- 359

  Fly   255 GFARPLV-----------AKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSG 308
               .|.|           .:||:  ||:||:|....|:|.|..:|:.:||| ..|.||: :||: 
 Frog   360 ---SPQVVERWQNIMTNRTREVF--LPRFKLEKSYNLQEVLSNMGVTDLFT-HGDFSGV-SDKN- 416

  Fly   309 GKVSQVSHKAFLEVNEEGAEAAGATSVA---VTNRAGFSTFLMADHPFAFVIRD--ANTIYFQGR 368
            ..:....|:..:.|||||.|||..|.|.   ::.:|.|    :||.||.|:|.:  .|.:.|.||
 Frog   417 MNIGLFQHQGTITVNEEGTEAAAVTVVGFMPLSTQARF----VADRPFLFLIYEHRTNCLIFMGR 477

  Fly   369 VVSP 372
            |.:|
 Frog   478 VANP 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 122/392 (31%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 123/394 (31%)

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