DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Spn43Ab

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster


Alignment Length:394 Identity:111/394 - (28%)
Similarity:194/394 - (49%) Gaps:38/394 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CIFLWVTSVACQTSK---------------EIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEG 54
            |:.|.:.:|:  .||               ::|..::..|.|:|:|:||.:|::.:::.|:||:|
  Fly     7 CLLLLLATVS--QSKTVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKG 69

  Fly    55 STAKELQSALGLPSEDKEAVAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREP 119
            .||.|||..|.|...|.:||:.|.|:....|.....   .:|||.||:|:......::....:..
  Fly    70 QTASELQQGLRLGPGDADAVSQRSGSYQQALTRDNN---FRLANNIYINENLEFKGSFRDVAQRQ 131

  Fly   120 FKSEAESISLTNGPV---AAERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESK 181
            |.|..:.:.. :.|.   .|:.||:.|..:|:|||..::....:....:.::||.:.:...|:..
  Fly   132 FDSNIDKLDF-HPPYNKRTADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKA 195

  Fly   182 FDPAKTRASTFQVTANKSVPVQMMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGL 246
            |...||...:|:..:.:||.|..|..:..|.......|||:|:||||.|.:.||.:.||...:||
  Fly   196 FRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKDGL 260

  Fly   247 SALEEKIVGFARPLVA-------KEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFA 304
            .:|::.:.|  :.|:|       ::|.:.||||.:.|...|:...:|||:..:|:...|...::.
  Fly   261 RSLQQSLSG--KNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYR 323

  Fly   305 DKSGGKVSQVSHKAFLEVNEEGAEAAGATSV--AVTNRAGFSTFLMADHPFAFVIRDANTIYFQG 367
            ......::.|.|||.:||.|.|.:....|.:  .:.:|   |....|||||.|.|:..::|.|.|
  Fly   324 MFVSHFINAVEHKANVEVTEAGVDQPLETGLLKGLFSR---SKKFEADHPFVFAIKYKDSIAFIG 385

  Fly   368 RVVS 371
            .:.:
  Fly   386 HIAN 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 108/379 (28%)
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 106/365 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446383
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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