DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpinb3d

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_958764.1 Gene:Serpinb3d / 394252 MGIID:2683295 Length:387 Species:Mus musculus


Alignment Length:393 Identity:140/393 - (35%)
Similarity:213/393 - (54%) Gaps:44/393 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ACQTSK---EIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSAL----------- 64
            |..|:|   |:|:.|.:|  :.|:..||:|:...|:|:.:||:.:|.::::..|           
Mouse     5 AVATTKFTLELYRQLRES--DNNIFYSPISMMRTLAMLLLGAKANTEQQIKKVLHFNETTKKTTE 67

  Fly    65 -GLPSEDKEAVAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESIS 128
             ...|.|:|.|..::..|:..|........||:.|.||....:...|.:...:|:.:::..||:.
Mouse    68 KSAESHDEENVHQQFQMLMTQLNKFNNAYDLKVPNSIYGAKDFPFLQTFLKDIRKYYQANVESLD 132

  Fly   129 LTNGPVAAE----RINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRA 189
            ..:   |||    :||.|:..||:||||.:...||:.|....:||||:||||||..|||...||.
Mouse   133 FAH---AAEESQKKINSWMARQTNGKIKDLFPSGSLNSSTILVLVNAVYFKGQWNHKFDEKHTRE 194

  Fly   190 STFQVTANKSVPVQMMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIV 254
            ..|.:..|.|.|||||.|...|...:..::.|:::|:||....|||.:.||.|::||...||::.
Mouse   195 EKFWLNKNTSKPVQMMKQRNKFNFIFLENVQAKIVEIPYKGKELSMFVLLPVEIDGLKKFEEQLT 259

  Fly   255 G-------FARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELF-TDKSDLSGLFADKSGGKV 311
            .       .|..:...|:||.||:||:|.:.:|:..||.:|:.:.| ..|:|.||: ::..|..|
Mouse   260 ADKLLQWTRAENMHMTELYLSLPQFKVEEKYDLRVPLEHMGMVDAFDPQKADFSGM-SNSQGLVV 323

  Fly   312 SQVSHKAFLEVNEEGAEAAGATSV-----AVTNRAGFSTFLMADHPFAFVIRD--ANTIYFQGRV 369
            |:|.||:|:||||||||||.|.||     :|.....||    .:|||.||::.  .|:|.|.|||
Mouse   324 SKVLHKSFVEVNEEGAEAATAMSVESRSLSVPKPNDFS----CNHPFLFVMKQNKTNSILFFGRV 384

  Fly   370 VSP 372
            .||
Mouse   385 SSP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 135/386 (35%)
Serpinb3dNP_958764.1 SERPIN 7..387 CDD:294093 137/389 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5154
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.760

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