DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpinb1c

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:368 Identity:126/368 - (34%)
Similarity:196/368 - (53%) Gaps:21/368 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAVAARYGALLND 84
            |::..|::|:...|.:.|||||.:.|:||::||.||||.:|...|...|  .|.:.:::.:|..:
Mouse    47 ELFHTLNESNPTGNTIFSPVSISSALAMVYLGARGSTAAQLSKTLHFDS--AEDIHSQFQSLTAE 109

  Fly    85 LQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPV-AAERINQWVLDQTS 148
            :..:.....||||||:|....|:....|..::::.:.::...:...:... |.:.|||||..||.
Mouse   110 VSKRGASHTLKLANRLYGEKTYNFLPEYLASIQKTYSADLALVDFQHASEDARKEINQWVKGQTE 174

  Fly   149 GKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGTFRA 213
            .||:.:...|.:.|..|.:||||.||||.|:.||....|..:.|:::...:..|:||........
Mouse   175 EKIQELFAVGVVDSMTKLVLVNATYFKGMWQKKFMARDTTDAPFRLSKKVTKTVKMMYLKNNLPF 239

  Fly   214 NYFRDLDAQVIELPYLNSNLSMTIFLPREVE----GLSALEEKI----VGFARPLVAKEVYLKLP 270
            .|..||..:|:|:||....|||.|.||.::|    ||..:|:::    :.....|...:|.:|||
Mouse   240 GYIPDLKCKVLEMPYQGGELSMVILLPEDIEDETTGLEEIEKQLTLEKLQECENLQNIDVCVKLP 304

  Fly   271 KFKIEFRDELKETLEKLGIRELF-TDKSDLSGLFADKSGGK---VSQVSHKAFLEVNEEGAEAAG 331
            |||:|....|...|.:||:::|| :.|:||||:    ||.:   :|::.||:::||||||.|...
Mouse   305 KFKMEESYILNSNLGQLGVQDLFSSSKADLSGM----SGSRDLFISKIVHKSYVEVNEEGTETDA 365

  Fly   332 ATSVAVTNRAGFSTFLMADHPFAFVIRDANT--IYFQGRVVSP 372
            |....|............||||.|.||...|  :.|.|||.||
Mouse   366 AMPGTVVGCCLMPMEFTVDHPFLFFIRHNPTAHVLFLGRVCSP 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 122/363 (34%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 124/366 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.830

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