DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dd and Serpina11

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_955018.2 Gene:Serpina11 / 380780 MGIID:2685741 Length:427 Species:Mus musculus


Alignment Length:377 Identity:102/377 - (27%)
Similarity:186/377 - (49%) Gaps:21/377 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAV 74
            ||......:..:|:.|::.... |::.||||:.:.|:::.:||...|..::..:||....:..|.
Mouse    55 VTPTITNFALRLYKQLAEEVAG-NILFSPVSLSSSLALLSLGAHADTQTQILESLGFNLTETPAA 118

  Fly    75 AARYG--ALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAE 137
            ....|  :||:.|........|||.:.::::.|....|.:..:.:|.:.:.|.|.:.|......:
Mouse   119 DVHRGFQSLLHTLDLPSPKLELKLGHFLFLDRQLKPQQRFLDSAKELYGALAFSANFTEAAATGQ 183

  Fly   138 RINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTR-ASTFQVTANKSVP 201
            :||..|..||.|::.|.:.  ..:.|...:|:|.|:||.:.:..||..:|| ..:|.:.....:.
Mouse   184 QINDLVRKQTYGQVVGCLP--EFSHDTLMVLLNYIFFKAKCKHPFDRYQTRKQESFSLDQRTPLR 246

  Fly   202 VQMMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLP-----REVEGLSALE-EKIVGFARPL 260
            :.||.|....|..|.::....|:::.|..:.| :.:.||     ::||  :||: |.:..:.:..
Mouse   247 IPMMRQKEMHRFLYDQEASCTVLQIEYSGTAL-LLLVLPDPGKMQQVE--AALQPETLRRWGQRF 308

  Fly   261 VAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNEE 325
            :...:.|.||:|.|.....|:|.|..:|:..||..::||||:.. :....||:|||||.:::||:
Mouse   309 LPSLLDLHLPRFSISATYNLEEILPLIGLGNLFDMEADLSGIMG-QLNKTVSRVSHKAIVDMNEK 372

  Fly   326 GAEAAGATSVAVTNRAGFSTFLMADH---PFAFVIRDANT--IYFQGRVVSP 372
            |.|||.|:.:.....|...|.....|   ||..::.:..|  :.|.|:||:|
Mouse   373 GTEAAAASGLLSQPPALNMTSAPQAHYNRPFLLLLWEVTTQSLLFLGKVVNP 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 97/366 (27%)
Serpina11NP_955018.2 SERPIN 58..421 CDD:294093 97/369 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

Return to query results.
Submit another query.