DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dd and AT1G62160

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_176407.2 Gene:AT1G62160 / 3767608 AraportID:AT1G62160 Length:220 Species:Arabidopsis thaliana


Alignment Length:235 Identity:70/235 - (29%)
Similarity:98/235 - (41%) Gaps:62/235 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 SMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGTFRANYFRDLDA-Q 222
            |.|.::.|:|                .|..:|.|...:.|..|  .|.....|...|....|. :
plant    25 SSTDELNAVL----------------RKIASSVFVDGSKKGGP--KMRGHKNFEKQYIAAYDGFK 71

  Fly   223 VIELPY------LNSNLSMTIFLPREVEGLSALEEKIV---GFA---RPLVAKEV-YLKLPKFKI 274
            |:.|||      .|.|.||..:||.:...|..|.:::.   ||.   .|....|| ..::|||||
plant    72 VLRLPYRQGRDNTNRNFSMYFYLPDKKGELDDLLKRMTSTPGFLDSHTPRERVEVDEFRIPKFKI 136

  Fly   275 EFRDELKETLEKLGIRELFTD-KSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAAGATSVAVT 338
            ||..|..         .:|:| :.|:|             ...||.:|::|||.|||.||:. |.
plant   137 EFGFEAS---------SVFSDFEIDVS-------------FYQKALIEIDEEGTEAAAATAF-VD 178

  Fly   339 NR--AGFSTFL--MADHPFAFVIRD--ANTIYFQGRVVSP 372
            |.  .||...|  :|||||.|:||:  ..|:.|.|::..|
plant   179 NEDGCGFVETLDFVADHPFLFLIREEQTGTVLFAGQIFDP 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 69/233 (30%)
AT1G62160NP_176407.2 serpin 1..218 CDD:476815 69/233 (30%)

Return to query results.
Submit another query.