DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and serpind1

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_878300.1 Gene:serpind1 / 359841 ZFINID:ZDB-GENE-030711-2 Length:507 Species:Danio rerio


Alignment Length:381 Identity:110/381 - (28%)
Similarity:187/381 - (49%) Gaps:50/381 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IYQLLSKSHTNQ--NLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPS-------EDKEAVAA 76
            :|:.| ::..||  |::::||.|...:.|:.:|...:|.::|...:|...       .|...|..
Zfish   145 LYRKL-RNRLNQTDNILLAPVGISIAMGMMGLGVGPNTQEQLFQTVGFAEFVNASNHYDNSTVHK 208

  Fly    77 RYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAERINQ 141
            .:..|.:.|..:..|..|:..|.:||.....:..::....:..:.:|.:|:...: |....:.||
Zfish   209 LFRKLTHRLFRRNFGYTLRSVNDLYVKRNVQIQDSFRADAKTYYFAEPQSVDFAD-PAFLVKANQ 272

  Fly   142 WVLDQTSGKIK---GMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQ 203
            .:...|.|.||   ..:||     ::..:|:|.:||||.||.||....|....|:|...|.|.|.
Zfish   273 RIQKITKGLIKEPLKSVDP-----NMAVMLLNYLYFKGTWEQKFPKELTHHRQFRVNEKKQVRVL 332

  Fly   204 MMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVGFARPLVAK----- 263
            ||...|::.|....:|:..:::|||. .|:||.|.:|:::.|:.:||::|   :..||.|     
Zfish   333 MMQNKGSYLAAADHELNCDILQLPYA-GNISMLIAVPQKLSGMRSLEQEI---SPTLVNKWLSNM 393

  Fly   264 -----EVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVN 323
                 ||.  .|:||:|...:|.|.|:::|:.::||:|.|.|.:.::|.  .::...|:..:.||
Zfish   394 TNRTREVV--FPRFKLEQNYDLIEHLKEMGMTDIFTEKGDFSPMTSEKV--IINWFKHQGSITVN 454

  Fly   324 EEGAEAAGATSVAVTNRAGF-----STFLMADHPFAFVIRDANT--IYFQGRVVSP 372
            |||.|||..|.:      ||     .|..:.|.||.|:|.:..|  :.|.||||.|
Zfish   455 EEGTEAAAMTHI------GFMPLSTQTRFIVDRPFLFLIYEHRTGCVVFMGRVVDP 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 106/376 (28%)
serpind1NP_878300.1 HCII 61..505 CDD:239002 110/381 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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