DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Spn42Dc

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster


Alignment Length:375 Identity:136/375 - (36%)
Similarity:205/375 - (54%) Gaps:25/375 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAV 74
            :|..|.|.||:         .:.|.|.||.|:::.|::.||||.||||:||::.|.|...|:..:
  Fly    19 ITKDALQQSKD---------PHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDRHHI 74

  Fly    75 AARYGAL-LNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAER 138
            |..:|.. .......:.||:||..||:||||...|...:|....:.|:|:||:....:...|.:.
  Fly    75 ALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQL 139

  Fly   139 INQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQ 203
            ||.||..:|..||..::...::.::..|||:|.:||||:|:..|.|..|....|.|..:..|.|.
  Fly   140 INDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVN 204

  Fly   204 MMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKI--VGFA---RPLVAK 263
            ||.|...||......|.|:.::|||..||:.|.|.||.||.||..||:::  |..|   ..|..:
  Fly   205 MMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALTLQ 269

  Fly   264 EVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAE 328
            :|.:.||:..||:..:||:.|.:|||.|:|:||:.|.|||..:||.|:|...|:.:::|||.|:|
  Fly   270 DVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSE 334

  Fly   329 AAGATSVAVT------NRAGFSTFLMADHPFAFVIRDANTIYFQGRVVSP 372
            ||..:.:.:.      |:..|.    |||||.|.||:...::|.||..:|
  Fly   335 AAAVSFMKIVPMMLNMNKKLFK----ADHPFVFYIRNPQAVFFAGRFSNP 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 134/371 (36%)
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 135/373 (36%)

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