DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dd and Spn28Db

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster


Alignment Length:377 Identity:132/377 - (35%)
Similarity:222/377 - (58%) Gaps:25/377 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YLCIFLWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP 67
            ||.:.|..|||..:....:.:|: ......|.:.||:.||..:||:.|||:|:||:||:|.|.||
  Fly     9 YLVLLLIATSVLGKFKLNLLELV-MDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLP 72

  Fly    68 SEDKEAVAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNG 132
            .:..| :|.:|..::::.| :..|  |:..|.:|||:.|.:.|:||..::..|.:|.:.      
  Fly    73 VDVTE-MAKKYERIMSNFQ-KHNG--LRFTNWLYVNETYEVRQDYNTLMKSTFMAEGKD------ 127

  Fly   133 PVAAERINQWV---LDQTSGK-IKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQ 193
            |::..:.:..:   :.:.|.| ::.:.:..::..:..|:|||.:|:.|.|:::|....|:...|.
  Fly   128 PLSQRKASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFH 192

  Fly   194 VTANKSVPVQMMAQMGTFRA---NYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVG 255
            ...||.|.|:||:.:|.||.   :|     .|:||:|:.||:|||.|.||.....||::|:.:..
  Fly   193 GDHNKKVYVRMMSHVGRFRIADHSY-----GQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRT 252

  Fly   256 FARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFL 320
            .:..||...|:::||||||:::.||.|:|:||||..:|::.||||||..:.:|.|::.|.||:|:
  Fly   253 LSESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSFI 317

  Fly   321 EVNEEGAEAAGATSVA--VTNRAGFSTFLMADHPFAFVIRDANTIYFQGRVV 370
            |:||.||....|:..|  :..:...||....:.||.|:|||.:|:||:||||
  Fly   318 EINERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHTVYFRGRVV 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 128/368 (35%)
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 128/368 (35%)

Return to query results.
Submit another query.