DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpinc1

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:393 Identity:130/393 - (33%)
Similarity:207/393 - (52%) Gaps:39/393 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LWVTSVA-CQTSKEIYQLLSKS-HTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP--S 68
            :|..|.| .:.:...||.|:.| :.|.|:.:||:||.|..:|..:||..:|.|:|.......  |
  Rat    81 VWELSKANSRFATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNNTLKQLMEVFKFDTIS 145

  Fly    69 EDKEAVAARYGALLND--LQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTN 131
            |........:.|.||.  .:...:...|..|||::.:...:.|::|.......:.::.:.:....
  Rat   146 EKTSDQIHFFFAKLNCRLYRKANKSSNLVSANRLFGDKSLTFNESYQDVSEIVYGAKLQPLDFKE 210

  Fly   132 GPVAAE-RINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVT 195
            .|..:. .||.||.::|.|:||.:|..|::......:|||.|||||.|:|||.|..||...|...
  Rat   211 NPEQSRVTINNWVANKTEGRIKDVIPQGAIDELTALVLVNTIYFKGLWKSKFSPENTRKEPFHKV 275

  Fly   196 ANKSVPVQMMAQMGTFRANYFRDL--DAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVGFAR 258
            ..:|..|.||.|.|.|:   :|.:  ..||:|:|:...:::|.:.||:..:.|:.:|:::.    
  Rat   276 DGQSCLVPMMYQEGKFK---YRRVGEGTQVLEMPFKGDDITMVLILPKPEKSLAKVEQELT---- 333

  Fly   259 PLVAKE---------VYLKLPKFKIEFRDELKETLEKLGIRELFT-DKSDLSGLFADKSGGK--- 310
            |.:.:|         :.:.:|:|:||....|||.|:.:|:.:||: :||.|.|:.|:   |:   
  Rat   334 PELLQEWLDELSEVMLVVHVPRFRIEDSFSLKEQLQDMGLVDLFSPEKSQLPGIIAE---GRDDL 395

  Fly   311 -VSQVSHKAFLEVNEEGAEAAGATSVAVTNRA---GFSTFLMADHPFAFVIRDA--NTIYFQGRV 369
             ||...|||||||||||:|||.:|||.:|.|:   ...|| .|:.||..:||:.  |||.|.|||
  Rat   396 FVSDAFHKAFLEVNEEGSEAAASTSVVITGRSLNPSRVTF-KANRPFLVLIREVALNTIIFMGRV 459

  Fly   370 VSP 372
            .:|
  Rat   460 SNP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 128/387 (33%)
Serpinc1NP_001012027.1 serpinC1_AT3 71..464 CDD:381002 130/393 (33%)

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