DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and serpinh1b

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001296752.1 Gene:serpinh1b / 30449 ZFINID:ZDB-GENE-990415-93 Length:405 Species:Danio rerio


Alignment Length:384 Identity:110/384 - (28%)
Similarity:187/384 - (48%) Gaps:37/384 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVACQTSK---EIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKE 72
            ||:|..::.   .:|..::|....:|:::|||.:.:.|.||.||::.|||.:::|.|...:...|
Zfish    28 TSMADTSANLAFNLYHNVAKEKGLENILISPVVVASSLGMVAMGSKSSTASQVKSVLKADALKDE 92

  Fly    73 AVAARYGALLNDLQG-QEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAA 136
            .:......||.::.. |......|::||:|.....|..:::....::.:..|...|:..:...|.
Zfish    93 HLHTGLSELLTEVSDPQTRNVTWKISNRLYGPSSVSFAEDFVKNSKKHYNYEHSKINFRDKRSAI 157

  Fly   137 ERINQWVLDQTSGKIKGMIDPGSMTSDVK----ALLVNAIYFKGQWESKFDPAKTRASTFQVTAN 197
            ..||:|....|.||:.      .:|.|||    |::|||::||..|:.||.........|.||.:
Zfish   158 NSINEWAAKTTDGKLP------EITKDVKNTDGAMIVNAMFFKPHWDEKFHHKMVDNRGFLVTRS 216

  Fly   198 KSVPVQMMAQMGTFRANYFRDLDAQ--VIELPYLNSNLSMTIFLPREVEGLSALE-----EKIVG 255
            .:|.|.||.:.|.:  .::.|.:.:  ::.:|..:...||...:|..||.|..||     :::..
Zfish   217 HTVSVPMMHRTGIY--GFYEDTENRFLIVSMPLAHKKSSMIFIMPYHVEPLDRLENLLTRQQLDT 279

  Fly   256 FARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKS--DLSGLFADKSGGK---VSQVS 315
            :...|..:.|.:.|||..:|...:|::.|.:||:.|. .|||  |||.:    ||.|   :|.|.
Zfish   280 WISKLEERAVAISLPKVSMEVSHDLQKHLGELGLTEA-VDKSKADLSNI----SGKKDLYLSNVF 339

  Fly   316 HKAFLEVNEEGAEAAGATSVAVTNRAGFSTFLMADHPFAFVIRD--ANTIYFQGRVVSP 372
            |.:.||.:.||...  ..|:..:.:........|||||.|:::|  .|:|.|.||:|.|
Zfish   340 HASSLEWDTEGNPF--DPSIFGSEKMRNPKLFYADHPFIFLVKDNKTNSILFIGRLVRP 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 104/374 (28%)
serpinh1bNP_001296752.1 hsp47 28..393 CDD:239001 107/379 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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