DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina3j

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:Serpina3j / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:385 Identity:106/385 - (27%)
Similarity:177/385 - (45%) Gaps:36/385 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSAL--GLPSEDKE 72
            :.|:....:..:|:.|:..:.|:|:..||:||...|:.:.:||:|:|.:|:...|  .|....:.
  Rat    47 LASINTDFAFSLYKELALKNPNKNIAFSPLSISAALASLSLGAKGNTLQEILEGLKFNLTETTEI 111

  Fly    73 AVAARYGALLNDL-----QGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNG 132
            .:...|..||..|     |||     :..||.::|.....:...:....:..:::|..:......
  Rat   112 DIHQNYRDLLQRLSQPGGQGQ-----ISRANLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQT 171

  Fly   133 PVAAERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTAN 197
            ..|.:.||.:|:.|:.||||.|:.  .:......:::|.:.|.|||...|||..|....|.:.:.
  Rat   172 CEARKFINDYVMIQSQGKIKEMVT--ELEERTSIVMLNFLLFTGQWSVPFDPDDTFMGKFILDSR 234

  Fly   198 KSVPVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALE----E 251
            :.|.|.|| :.......||.|  |...|:||.|.....:|.| ||     .:||  ::|.    .
  Rat   235 RPVKVLMM-KTEDLTTPYFWDEELKCTVVELNYKGHGKAMFI-LPDQGKMEQVE--ASLHPGTLR 295

  Fly   252 KIVGFARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSH 316
            |.....:|.:..|  |.||||.:....:|:..|.:|||.::|..::||||: |.....:|||:.|
  Rat   296 KWTDSLKPRIIDE--LHLPKFSLSKTYKLENILPELGIMDVFNTQADLSGI-AGAKDVRVSQMIH 357

  Fly   317 KAFLEVNEEGAEAAGATSVAVTNRAG--FSTFLMADHPFAFVIRDANT--IYFQGRVVSP 372
            ...|.:.|.|.||...|.|....|..  ..||:.....|.:::.:.|:  |.|..:|::|
  Rat   358 NTVLGMAETGTEAEATTRVEYNFRPAKLNDTFVNFVRKFLYMVLEPNSELISFMRKVINP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 105/381 (28%)
Serpina3jXP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 105/383 (27%)

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