DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina3m

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001257911.1 Gene:Serpina3m / 299276 RGDID:735068 Length:419 Species:Rattus norvegicus


Alignment Length:384 Identity:118/384 - (30%)
Similarity:193/384 - (50%) Gaps:31/384 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSAL--GLPSED 70
            |.:.|:....:..:|::|:..:.::|:|.||:||...|::|.:||:|:|.:|:...|  .|....
  Rat    45 LTLESINTDFAFSLYKMLALKNPDKNVVFSPLSISAALAIVSLGAKGNTLEEILEVLRFNLTESY 109

  Fly    71 KEAVAARYGALLNDLQGQEEGPILKL--ANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGP 133
            :..:...:|.||..|  .:.|..:|:  .|.::::....:...:....|..::.||.:.......
  Rat   110 ETDIHQGFGHLLQRL--SQPGDQVKIITGNALFIDKNLQVLAEFQEKTRALYQVEAFTADFQQPR 172

  Fly   134 VAAERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANK 198
            |..:.||.:|.:||.|||:.::  ..:......:|||.:.|:|:|:..|||..|..|.|.|...:
  Rat   173 VTEKLINDYVRNQTQGKIQELV--SGLKERTSMVLVNYLLFRGKWKVPFDPDYTFESEFYVDEKR 235

  Fly   199 SVPVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALE--EKIV 254
            ||.|.|| ::......||||  |...|:||.| ..|.|....||     ::||.....|  :|..
  Rat   236 SVKVSMM-KIEELTTPYFRDEELSCSVLELKY-TGNSSALFILPDKGRMQQVEASLQPETLKKWK 298

  Fly   255 GFARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGK---VSQVSH 316
            ...||....|:|  ||:..|.....|:|.|.:||||::|:.::|||.:    :|.|   ||||.|
  Rat   299 DSLRPRKIDELY--LPRLSISTDYSLEEVLPELGIRDVFSQQADLSRI----TGAKDLSVSQVVH 357

  Fly   317 KAFLEVNEEGAEAAGATSVAVTNRAGFSTFLM-ADHPFAFVIRDAN--TIYFQGRVVSP 372
            |..|:|||.|.|||.||...:..|:|....:: .:.||...:...:  ||.|..:|::|
  Rat   358 KVVLDVNETGTEAAAATGANLVPRSGRPPMIVWFNRPFLIAVSHTHGQTILFMAKVINP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 116/378 (31%)
Serpina3mNP_001257911.1 serpinA3_A1AC 37..416 CDD:381019 117/382 (31%)

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