DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina16

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_853661.2 Gene:Serpina16 / 299271 RGDID:727888 Length:415 Species:Rattus norvegicus


Alignment Length:382 Identity:98/382 - (25%)
Similarity:165/382 - (43%) Gaps:62/382 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP---SEDKEAVAARYGALL 82
            :|:.|.:....:||:.||:.|...|.::....:.....::...||..   :.|.:| |:.||.||
  Rat    55 LYKQLPQPKRGKNLIFSPLGIIVPLVLLAFQDKPKARHQVLQDLGFTVTGALDTKA-ASEYGKLL 118

  Fly    83 NDLQ-----GQEEGPIL-------------KLANRIYVNDQYSLNQNYNLAVREPFKSEAESISL 129
            ::|.     |...|.:|             ||||..|         |.|:.:          ||.
  Rat   119 SNLLHTKNCGIYTGSLLFIDKTLKPAKTFVKLANSSY---------NSNVVL----------ISF 164

  Fly   130 TNGPVAAERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQV 194
            .|..:|.::|:..:..:|.|||..::  ..:.......|.|..:|||:|:..|:...||...|.:
  Rat   165 GNYGLAQKQIDLAIRARTHGKITKLL--RILKPPTNLFLANYNFFKGKWKYPFNRKHTRMRYFWL 227

  Fly   195 TANKSVPVQMMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPR----EVEGLSALEEKIVG 255
            .......|.||.::|.|:..||..:.:.|::||: ..::|...|||.    |....:.||:....
  Rat   228 EDGTKTLVPMMQRVGWFQLQYFSQMHSYVLQLPF-TCSISGVFFLPDDGKFEESEKALLEQSFET 291

  Fly   256 FARPLVAKEVYLKLPKFKIEFR---DELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHK 317
            :.:|....:.:|..|||.|...   :.||.....:   :||::..|||.:...|:...||...|:
  Rat   292 WIQPFPMSKRWLFFPKFSIPVALHLENLKHVNSNI---KLFSEHMDLSRITLQKAPLTVSTAVHR 353

  Fly   318 AFLEVNEEGAEAAGATSVAVTNRAGFSTFLMADHPFAFVIRD--ANTIYFQGRVVSP 372
            ..|.|||:|.|...:..     ....:| |..:..|..:|.|  :|::.|.|:||:|
  Rat   354 VELTVNEDGEEKDESQP-----EPDLAT-LHFNRSFLLLILDETSNSLLFMGKVVNP 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 97/380 (26%)
Serpina16NP_853661.2 serpinA16_HongrES1-like 40..406 CDD:381053 98/382 (26%)

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