DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpinh1

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_058869.2 Gene:Serpinh1 / 29345 RGDID:69302 Length:417 Species:Rattus norvegicus


Alignment Length:374 Identity:106/374 - (28%)
Similarity:178/374 - (47%) Gaps:40/374 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAVAARYGALLNDL 85
            :||.::|....:|:::||:.:.:.|.:|.:|.:.:||.:.::.|.......|.|....|.||..|
  Rat    53 LYQAMAKDQAVENILLSPLVVASSLGLVSLGGKATTASQAKAVLSAEKLRDEEVHTGLGELLRSL 117

  Fly    86 QGQEEGPIL-KLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAERINQWVLDQTSG 149
            .......:. ||.:|:|.....|...::..:.::.:..|...|:..:...|.:.||:|....|.|
  Rat   118 SNSTARNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRDKRSALQSINEWASQTTDG 182

  Fly   150 KIKGMIDPGSMTSDVK----ALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGT 210
            |:.      .:|.||:    ||||||::||..|:.||.........|.||.:.:|.|.||.:.|.
  Rat   183 KLP------EVTKDVERTDGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVTMMHRTGL 241

  Fly   211 FRANYFRD--LDAQVIELPYLNSNLSMTIFLPREVEGLSALE-----EKIVGFARPLVAKEVYLK 268
            :  ||:.|  ...|::|:|..:...|:.|.:|..||.|..||     |::..:...:..|.|.:.
  Rat   242 Y--NYYDDEKEKLQLVEMPLAHKLSSLIILMPHHVEPLERLEKLLTKEQLKTWMGKMQKKAVAIS 304

  Fly   269 LPKFKIEFRDELKETLEKLGIRE-LFTDKSDLSGLFADKSGGK---VSQVSHKAFLEVNEEG--- 326
            |||..:|...:|::.|..||:.| :..:|:|||.:    ||.|   ::.|.|....|.:.||   
  Rat   305 LPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRM----SGKKDLYLASVFHATAFEWDTEGNPF 365

  Fly   327 -AEAAGATSVAVTNRAGFSTFLMADHPFAFVIRD--ANTIYFQGRVVSP 372
             .:..|...:....      ...|||||.|::||  :.::.|.||:|.|
  Rat   366 DQDIYGREELRSPK------LFYADHPFIFLVRDNQSGSLLFIGRLVRP 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 105/372 (28%)
Serpinh1NP_058869.2 serpinH1_CBP1 35..416 CDD:381003 106/374 (28%)
Prevents secretion from ER. /evidence=ECO:0000305 414..417
Blue background indicates that the domain is not in the aligned region.

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