DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dd and HMSD

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_016881199.1 Gene:HMSD / 284293 HGNCID:23037 Length:217 Species:Homo sapiens


Alignment Length:188 Identity:42/188 - (22%)
Similarity:78/188 - (41%) Gaps:26/188 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VSIETILSMVFMGAEGSTAKELQSAL---GLPSEDKEAVAARYGALLNDLQGQEEGPILKLANRI 100
            :||.:.|:||||||:|:||.::..||   .:..||.: :...:.:||..:...:...:|:.||.:
Human     1 MSISSALAMVFMGAKGNTAAQMSQALCFSKIGGEDGD-IHRGFQSLLVAINRTDTEYVLRTANGL 64

  Fly   101 YVNDQYSLNQNYNLAVREPFKSEAESISLTNG-PVAAERINQWVLDQT---SGKIK-------GM 154
            :....|.....:..:..:.:::..:.:...|. ..:..|:|.||.|:|   .|..|       |:
Human    65 FGEKSYDFLTGFTDSCGKFYQATIKQLDFVNDTEKSTTRVNSWVADKTKVHKGTKKHHQQRPHGL 129

  Fly   155 IDPGSMTSDVKALLVNAIY-----------FKGQWESKFDPAKTRASTFQVTANKSVP 201
            .|....|....:...::..           |.|.....|.||:|...|:.:......|
Human   130 HDMALWTHQTLSCSASSTLSVPLQAWIRHGFHGAILCLFAPARTVFPTWDICVYNQTP 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 42/188 (22%)
HMSDXP_016881199.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.