DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina3b

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_766612.1 Gene:Serpina3b / 271047 MGIID:2182835 Length:420 Species:Mus musculus


Alignment Length:391 Identity:108/391 - (27%)
Similarity:188/391 - (48%) Gaps:44/391 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP-SEDK 71
            |.:.|:....:...|:.|:..:.::|:..||..|.|.|:.:.:||:|:|.:|:...|... :|..
Mouse    45 LTLASINTDFAFSFYKELALKNPHKNIAFSPFGIATALNSLTLGAKGNTLEEILEVLKFNLTETS 109

  Fly    72 EA-VAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVA 135
            || :...:..||..|....:...::..|.::|.....:...:....|..:.:|..:.:......|
Mouse   110 EADIHQGFKHLLQRLSHPGDQVQIRTGNALFVEKHLQILAEFKEKARALYHTEVFTANFQQPHEA 174

  Fly   136 AERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSV 200
            .:.||.::.:||.||||.::  ..|..:...::||.::||.:|...|:...|....|.|..::.|
Mouse   175 MKLINSYMSNQTQGKIKELV--SDMDGNTSMVIVNDLFFKAEWMVPFNSDDTFMGKFIVDRSRHV 237

  Fly   201 PVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALE----EKIV 254
            .|.|| :....|..||||  |...|:||.|..:..:|.| ||     ::||  ::|:    :|..
Mouse   238 KVPMM-KTKNLRTPYFRDEELKCTVVELNYKGNGKAMFI-LPDQGKMQQVE--ASLQPGTLKKWR 298

  Fly   255 GFARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGK---VSQVSH 316
            ...||...||  |.||||.:.....|::.|.:|||||||:.::||||:    :|.|   ||::.|
Mouse   299 KSLRPRKIKE--LHLPKFSLSQHYNLEDILPELGIRELFSTQADLSGI----TGVKNITVSEMIH 357

  Fly   317 KAFLEVNEEGAEAAGATSVAVTNRAGFS--------TFLMADHPFAFVIRDANT--IYFQGRVVS 371
            ...|::.|:|.|....|.|      |::        .|:..:..|.:::.|...  |:..|:|::
Mouse   358 STELDMTEKGTEGDAITIV------GYNFMSAKLKPVFVKFEDQFLYIVLDQGDLWIHVMGKVIN 416

  Fly   372 P 372
            |
Mouse   417 P 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 104/378 (28%)
Serpina3bNP_766612.1 SERPIN 51..414 CDD:294093 104/380 (27%)
RCL 367..392 6/30 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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