DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dd and Serpina3n

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:382 Identity:120/382 - (31%)
Similarity:194/382 - (50%) Gaps:26/382 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSAL--GLPSED 70
            |.:.|:....:..:|:.|:..:.::|:|.||:||...|::|.:||:|::.:|:...|  .|....
  Rat    45 LTLASINTDFAFSLYKKLALRNPDKNVVFSPLSISAALAVVSLGAKGNSMEEILEGLKFNLTETP 109

  Fly    71 KEAVAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVA 135
            :..:...:|.||..|....:...:...|.:::..:..:...:....:..:::||.:........|
  Rat   110 ETEIHRGFGHLLQRLSQPRDEIQISTGNALFIEKRLQVLAEFQEKAKALYQAEAFTADFQQSREA 174

  Fly   136 AERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSV 200
            .:.||.:|..||.|||:|:|.  ::......:|||.|||||:|:..|||..|..|.|.....:.|
  Rat   175 KKLINDYVSKQTQGKIQGLIT--NLAKKTSMVLVNYIYFKGKWKVPFDPRDTFQSEFYSGKRRPV 237

  Fly   201 PVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALEEKIV---- 254
            .|.|| ::......|.||  |:..|:||.| ..|.|....||     ::||  ::|:.:.:    
  Rat   238 KVPMM-KLEDLTTPYVRDEELNCTVVELKY-TGNASALFILPDQGKMQQVE--ASLQPETLRRWK 298

  Fly   255 GFARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAF 319
            ...||.:..|:|  ||||.|.....|::.|.:|||:|:|:.::||||:..||. ..||||.|||.
  Rat   299 DSLRPSMIDELY--LPKFSISADYNLEDVLPELGIKEVFSTQADLSGITGDKD-LMVSQVVHKAV 360

  Fly   320 LEVNEEGAEAAGATSVA-VTNRAGFSTFLMA-DHPFAFVIRDANTIY--FQGRVVSP 372
            |:|.|.|.|||.||.|. |...|.....::| |.||..:|.|..|..  |..::.:|
  Rat   361 LDVAETGTEAAAATGVKFVPMSAKLDPLIIAFDRPFLMIISDTETAIAPFLAKIFNP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 118/376 (31%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 120/382 (31%)
RCL 367..394 10/26 (38%)

Return to query results.
Submit another query.