DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina4

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:387 Identity:103/387 - (26%)
Similarity:182/387 - (47%) Gaps:59/387 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALG-------LPSEDKEAVAARY 78
            :|.|::..::.:|:..||:||...|:::..||.|.|..::...||       ||.     :...:
  Rat    59 LYHLIASQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLTKLSLPE-----IHEGF 118

  Fly    79 GALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAERINQWV 143
            .:|.:.:......|.:.:.:.:.::....:...:..|:...:.|:....:..:...|.:.||.:|
  Rat   119 RSLQHTIARPFTEPQISVGSALILSQNLQILSEFVSAIETSYNSKVLHANFRDKEAAVQLINNYV 183

  Fly   144 LDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQM 208
            ...|.||||.::  ..::.|||.:|||.|:|:|.|:..|..::...|.|.|..|..|.:.||.| 
  Rat   184 KQNTQGKIKNLV--SDLSPDVKMVLVNYIFFQGLWKKPFPSSRVSTSDFYVDENTVVKIPMMLQ- 245

  Fly   209 GTFRANYF----RDLDAQVIELPYLNSNLSMTIFLP-----REVE-----GLSALEEKIVG---F 256
              .:.:::    |.:...|:.:.|....::..| ||     .|||     |:....::::.   |
  Rat   246 --DKEDHWYLEDRRVPCTVLRMDYRGDAVAFFI-LPDQGKMNEVEQVLSPGMLLRWKRLLQNRFF 307

  Fly   257 ARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLE 321
            .|.|:     |:||||.|....||.|.|..||.::|||..::.|.: :.|....:|:|.||..|:
  Rat   308 YRKLI-----LQLPKFSISNSYELDEILPDLGFQDLFTPNANFSNI-SKKEKLYLSKVFHKTVLD 366

  Fly   322 VNEEGAEAAGATSVAVTNRAGFSTF---------LMADHPFAFVIRDANT--IYFQGRVVSP 372
            |||.|.:||.||       ..|:||         |:.:.||..::...::  |.|.|:||:|
  Rat   367 VNEVGTKAAAAT-------GSFATFFSAQPKKRYLIFNRPFLVILYSTSSQDILFMGKVVNP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 100/382 (26%)
Serpina4NP_659565.2 SERPIN 52..418 CDD:294093 100/382 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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