DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina3m

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_033279.2 Gene:Serpina3m / 20717 MGIID:98378 Length:418 Species:Mus musculus


Alignment Length:383 Identity:122/383 - (31%)
Similarity:192/383 - (50%) Gaps:28/383 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP-SEDK 71
            |.:.|:....:..:|:.::..:.::|:|.||:||...|::|.:||:|:|.:|:...|... :|..
Mouse    45 LTLASINTDFAFSLYKKMALKNPDKNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLTETS 109

  Fly    72 EA-VAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVA 135
            || :...:|.||..|...|:...:.:.|.:::.....:...::...|..:::||.:........|
Mouse   110 EADIHQGFGHLLQRLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEA 174

  Fly   136 AERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSV 200
            .:.||.:|.:||.|.||.:|  ..:......:|||.|||||:|:..|||..|..|.|.:...:||
Mouse   175 TKLINDYVSNQTQGMIKKLI--SELDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSV 237

  Fly   201 PVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALEEKIVGFAR 258
            .|.|| :|......:|||  |...|:||.| ..|.|....||     ::||. |...|.:..:.:
Mouse   238 KVPMM-KMKFLTTRHFRDEELSCSVLELKY-TGNASALFILPDQGRMQQVEA-SLQPETLRKWWK 299

  Fly   259 PLVAKEV-YLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEV 322
            .|..::: .|.||||.|.....||:.|.:|||:|:|:.::||||:...|. ..||||.|||.|:|
Mouse   300 SLKTRKIGELYLPKFSISTDYNLKDILPELGIKEIFSKQADLSGITGTKD-LSVSQVVHKAVLDV 363

  Fly   323 NEEGAEAAGATSVAVTNRAGF------STFLMADHPFAFVI--RDANTIYFQGRVVSP 372
            .|.|.|||.||....    ||      :..:..:.||..||  ....|..|..:|.:|
Mouse   364 AETGTEAAAATGFIF----GFRSRRLQTMTVQFNRPFLMVISHTGVQTTLFMAKVTNP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 120/377 (32%)
Serpina3mNP_033279.2 serpinA3_A1AC 37..418 CDD:381019 122/383 (32%)
RCL 367..392 8/28 (29%)

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