DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina3k

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_035588.2 Gene:Serpina3k / 20714 MGIID:98377 Length:418 Species:Mus musculus


Alignment Length:382 Identity:128/382 - (33%)
Similarity:200/382 - (52%) Gaps:27/382 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP-SEDK 71
            |.:.||....:..:|:.|:..:.::|:|.||:||...|::|.:||:|.|.:|:...|... :|..
Mouse    46 LTLASVNTDFAFSLYKKLALKNQDKNIVFSPLSISAALALVSLGAKGKTMEEILEGLKFNLTETP 110

  Fly    72 EA-VAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVA 135
            || :...:|.||..|...|:...:.:.|.:::.....:...::...|..:::||.:........|
Mouse   111 EADIHQGFGNLLQSLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEA 175

  Fly   136 AERINQWVLDQTSGKIKGMI---DPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTAN 197
            ...||.:|.:||.|.||.:|   |.|::     .:|||.|||||:|:..|||..|..|.|.:...
Mouse   176 KNLINDYVSNQTQGMIKKLISELDDGTL-----MVLVNYIYFKGKWKISFDPQDTFESEFYLDEK 235

  Fly   198 KSVPVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALEEKIVG 255
            :||.|.|| :|....|.:|||  |...|:||.| ..|.|..:.||     ::||. |...|.:..
Mouse   236 RSVKVPMM-KMKLLTARHFRDEELSCSVLELKY-TGNASALLILPDQGRMQQVEA-SLQPETLRK 297

  Fly   256 FARPLVAKEV-YLKLPKFKI--EFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHK 317
            :.:.|.:.:: .|.||||.|  ::|.| ::.|.::||:|:||:::||||:...|. ..||||.||
Mouse   298 WRKTLFSSQIEELNLPKFSIASDYRLE-EDVLPEMGIKEVFTEQADLSGITEAKK-LSVSQVVHK 360

  Fly   318 AFLEVNEEGAEAAGATSVAVTNRAGFSTFLMADHPFAFVI--RDANTIYFQGRVVSP 372
            |.|:|.|.|.|||.||.|....|......:..:.||..||  ..|.:|.|..:|.:|
Mouse   361 AVLDVAETGTEAAAATGVIGGIRKAVLPAVCFNRPFLIVIYHTSAQSILFMAKVNNP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 123/369 (33%)
Serpina3kNP_035588.2 SERPIN 57..417 CDD:214513 124/369 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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