DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina1b

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_033270.3 Gene:Serpina1b / 20701 MGIID:891970 Length:413 Species:Mus musculus


Alignment Length:362 Identity:104/362 - (28%)
Similarity:172/362 - (47%) Gaps:21/362 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSAL--GLPSEDKEAVAARYGALLNDL 85
            :|:.:|:|: |:..|||||.|..:|:.:|::|.|..::...|  .|....:..:...:..||..|
Mouse    58 ELVHQSNTS-NIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLLQTL 121

  Fly    86 QGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAERINQWVLDQTSGK 150
            ...:....|...|.::||:...|.:.:....:..:::|..|::......|.:.||.:|...|.||
Mouse   122 NRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNFAESEEAKKVINDFVEKGTQGK 186

  Fly   151 IKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGTFRANY 215
            |...:.  .:..|....|.|.|.|||:|:..|||..|..:.|.|..:.:|.|.||...|....::
Mouse   187 IVEAVK--ELDQDTVFALANYILFKGKWKKPFDPENTEEAEFHVDKSTTVKVPMMMLSGMLDVHH 249

  Fly   216 FRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVGFARPLVAK--------EVYLKLPKF 272
            ...|.:.|:.:.|. .|.|....||.:.: :..||:.:   .:.|::|        .|.:.:|:.
Mouse   250 CSILSSWVLLMDYA-GNASAVFLLPEDGK-MQHLEQTL---NKELISKILLNRRRRLVQIHIPRL 309

  Fly   273 KIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAAGATSVAV 337
            .|.....||..:..|||..:|.:.:||||:..:.:..|:|:..|||.|.::|.|.|||.|| |..
Mouse   310 SISGDYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSKAVHKAVLTIDETGTEAAAAT-VFE 373

  Fly   338 TNRAGFSTFLMADHPFAFVIRDANT--IYFQGRVVSP 372
            .........|..||||.|:|.:.:|  ..|.|:||.|
Mouse   374 AVPMSMPPILRFDHPFLFIIFEEHTQSPIFVGKVVDP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 103/360 (29%)
Serpina1bNP_033270.3 serpinA1_A1AT 44..412 CDD:381012 104/362 (29%)
RCL 368..387 4/19 (21%)

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