DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and srp-2

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:360 Identity:124/360 - (34%)
Similarity:195/360 - (54%) Gaps:19/360 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAVAARYGA 80
            ||...:..|.:..|:. ::|:||:||...|:::..||.|||.|||:..||     ...:...:..
 Worm     8 QTDFALKLLATLPHSG-SVVLSPLSISLGLALIHAGACGSTQKELEDVLG-----GSRIFEEFSG 66

  Fly    81 LLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAERINQWVLD 145
            |:..:...:.|...|:.||::||..|:::|:|...|.:.:|:..||:..:....||:.:|.:|.:
 Worm    67 LMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVEN 131

  Fly   146 QTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGT 210
            .|:||||.:| |....::..|.||||:|||..|:|||....|....|..:..:|..:..:.::..
 Worm   132 HTNGKIKDLI-PADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDE 195

  Fly   211 FRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVG-----FARPLVAKEVYLKLP 270
            .| :|..|:..||:.|.|.:...::.||||::..||....|||.|     ....|.:..|.:::|
 Worm   196 HR-DYTEDVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALEKINGEYIQNLLNDLKSSYVSVQIP 259

  Fly   271 KFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAAGATSV 335
            |||||...:||||||.:||:|:|.:.:||||: |||.  .:|...|||.:||:|:|..||.|::.
 Worm   260 KFKIEKELDLKETLEAIGIKEIFAEGADLSGI-ADKV--FISSGIHKAIIEVDEDGTTAAAASAF 321

  Fly   336 AVTNR---AGFSTFLMADHPFAFVIRDANTIYFQG 367
            .|...   ....|..:|||||.|.:...|...|.|
 Worm   322 KVQLEMMIMAEPTQFVADHPFLFAVLFENHTLFLG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 124/360 (34%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 124/360 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 209 1.000 Domainoid score I1654
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 210 0.433 Inparanoid score I2373
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.880

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