DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina3c

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:383 Identity:126/383 - (32%)
Similarity:189/383 - (49%) Gaps:31/383 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP-SEDK 71
            |.:.|:....:..:|:.|:..:.:.|:|.||:||...|::|.:||:|:|.:|:...|... :|..
Mouse    64 LTLASINTDFAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETP 128

  Fly    72 EA-VAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVA 135
            || :...:|.||..|....|...:...:.::|.....:...:....|..:::||.:........|
Mouse   129 EADIHQGFGHLLQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEA 193

  Fly   136 AERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSV 200
            .:.||.:|.:||..||||:|  ..:.:|...:|||.|||||:|:..|:|..|..|.|.:...:||
Mouse   194 TKLINDYVSNQTQRKIKGLI--SDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSV 256

  Fly   201 PVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALE--EKIVGF 256
            .|.|| ::.|....||||  |...|:||.| ..|.|....||     ::||.....|  .|....
Mouse   257 KVPMM-KIKTLTTPYFRDEELSCTVVELKY-KGNASALFILPDQGRMQQVEASLQPETLRKWKNS 319

  Fly   257 ARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGK---VSQVSHKA 318
            .||....|:|  ||||.|.....||..|.:|||:|:|:.::||||:    :|.|   |||:.|||
Mouse   320 LRPRKMGELY--LPKFSISTDYSLKNILPELGIKEIFSKQADLSGI----TGTKDLIVSQMVHKA 378

  Fly   319 FLEVNEEGAEAAGATSV--AVTNRAGFSTFLMADHPFAFVI--RDANTIYFQGRVVSP 372
            .|:|.|.|.|...||.|  .:.:|   .|.|..:..|..||  .|..|..|..::..|
Mouse   379 VLDVAETGTEGVAATGVNFRILSR---RTSLWFNRTFLMVISHTDVQTTLFIAKITHP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 123/370 (33%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 126/383 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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