DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dd and Serpina3a

DIOPT Version :10

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:Serpina3a / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:384 Identity:122/384 - (31%)
Similarity:185/384 - (48%) Gaps:34/384 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVACQT--SKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSAL--GLPSEDK 71
            |..:|.|  :..:|:.|...:.::|:|.|..||.|.|.::.:||:.:|.||:...|  .|....:
  Rat    36 TLSSCNTDFAFSLYKELVLKNPDKNIVFSSFSISTALVLLSLGAKNNTLKEILEGLKFNLTETPE 100

  Fly    72 EAVAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAA 136
            ..:...|..||..|....:...:...:.:::.....:...:....|..:::||.|........|.
  Rat   101 AEIHQGYEHLLQRLNLPGDQVQISTGSALFIKKHLQILAEFQEKARALYQAEAFSTDFQQPHEAK 165

  Fly   137 ERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVP 201
            :.||.:|..||.||||.:|  ..:......:|||.|||||:|:..|||..|..|.|.:...|||.
  Rat   166 KLINDYVRKQTQGKIKELI--SVLDKKTSMVLVNYIYFKGKWKMPFDPHDTFQSEFYLDEKKSVK 228

  Fly   202 VQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALEEKIV----G 255
            |.|| ::......||||  |...|:||.| ..|.|....||     ::||  ::|:.:.:    .
  Rat   229 VPMM-KIEKLTTPYFRDEELSCSVLELKY-TGNASALFILPDQGRMQQVE--ASLQPETLRRWKD 289

  Fly   256 FARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGK---VSQVSHK 317
            ..||....|  |::|||.|.....|.:.|.:|||||:|:.::|||.:    :|.|   ||||.||
  Rat   290 TLRPRRIDE--LRMPKFSISTDMRLGDILPELGIREVFSQQADLSRI----TGAKDLSVSQVVHK 348

  Fly   318 AFLEVNEEGAEAAGATSVAVTNRAG--FSTFLMADHPFAFVIRDANT--IYFQGRVVSP 372
            |.|:|.|.|.|||.||.|.:.....  :...:..:.||..:|.|.||  ..|..:|.:|
  Rat   349 AVLDVTETGTEAAAATGVKIIPMCAKFYYVTMYFNRPFLMIISDTNTHIALFMAKVTNP 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 120/381 (31%)
Serpina3aXP_006240581.2 serpinA3_A1AC 27..408 CDD:381019 122/384 (32%)

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