DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dd and serpinh1

DIOPT Version :9

Sequence 1:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_002937290.2 Gene:serpinh1 / 100490491 XenbaseID:XB-GENE-1005105 Length:450 Species:Xenopus tropicalis


Alignment Length:370 Identity:104/370 - (28%)
Similarity:174/370 - (47%) Gaps:32/370 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAVAARYGALLNDL 85
            :||.::|....:|:::|||.:.:.|.:|.:|.:.|||.:.::.|.......|.:.:....|||::
 Frog    86 LYQTMAKDKNVENILLSPVVVASSLGLVSLGGQASTAAQAKAVLSADKLSDEHIHSGLAELLNEV 150

  Fly    86 QGQEEGPIL-KLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAERINQWVLDQTSG 149
            .......:. |:.||:|.....|...::....::.:..|...|:..:.......||:|....|.|
 Frog   151 SNSTARNVTWKIGNRLYGPSSISFTDDFVKNSKKHYNYEHSKINFRDKRSTLRSINEWASQATDG 215

  Fly   150 KIKGMIDPGSMTSDVK----ALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGT 210
            |:.      .:|||::    ||:|||::||..|:.:|.........|.||.:.:|.|.||.:.|.
 Frog   216 KLP------EVTSDMERTDGALIVNAMFFKPHWDERFHHQMVDNRGFMVTRSFTVSVPMMHRTGL 274

  Fly   211 FRANYFRD--LDAQVIELPYLNSNLSMTIFLPREVEGLSALE-----EKIVGFARPLVAKEVYLK 268
            :  ||..|  ...|::|:|..:...||...:|..||.|..:|     |::..:...:..|.|.:.
 Frog   275 Y--NYLEDEKNGLQILEMPLAHKLSSMLFIMPHHVEPLERVEKLLTREQVKTWVGKMTKKAVAVS 337

  Fly   269 LPKFKIEFRDELKETLEKLGIRE-LFTDKSDLSGLFADKSGGK---VSQVSHKAFLEVNEEGAEA 329
            |||..:|...:|::.|..||:.| :...|:|||.:    ||.|   ::.:.|.|.||.:.:|...
 Frog   338 LPKVSLEVSHDLQKHLGDLGLTEAIDKTKADLSKI----SGKKDLYLASMFHAAALEWDTDGNPF 398

  Fly   330 AGATSVAVTNRAGFSTFLMADHPFAFVIRDANT--IYFQGRVVSP 372
            ..........||  ......||||.|:|:|..|  |.|.||:|.|
 Frog   399 DSDIYSREELRA--PKLFYVDHPFVFLIKDEKTDSILFIGRLVRP 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 101/365 (28%)
serpinh1XP_002937290.2 serpinH1_CBP1 68..449 CDD:381003 104/370 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.