DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb6c

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_683744.2 Gene:Serpinb6c / 97848 MGIID:2145481 Length:379 Species:Mus musculus


Alignment Length:373 Identity:126/373 - (33%)
Similarity:200/373 - (53%) Gaps:21/373 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL----PDDKKEVAAKY 77
            ||.:..::|. |:.:.|:..||:|:..||.|..:||:..||.::...|.|    ..:..:|...:
Mouse    12 FALNLLKILG-EDRSKNVFLSPISISSALVMVLLGAKGTTAIQITQALSLGKCSSSEDGDVHQGF 75

  Fly    78 KDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKAS-SIVNNW 141
            :.|||::.......:|..|||::..|.|.::.|:.......:.||.|.:|.....:.| ..:|.|
Mouse    76 QLLLSEVNKTGTQYSLKAANRLFGEKTFDILASFKDSCHKFYEAEMEELDFKGATEQSRQHINTW 140

  Fly   142 VDNQTRGKIKDLVSSNDM-SKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMMSL 205
            |..:|..|||:|:|...: |...||::||:||||:||.:||.:.|::..|:||..:..||:||..
Mouse   141 VAKKTEDKIKELLSPGTIHSNTPLILVNAVYFKGKWEKQFNKEDTREMPFKVSKNEEKPVQMMFQ 205

  Fly   206 FQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFK----PKLSKM---DV 263
            ..:|:..:..|:..||:.|||..:.|:|:|.|||:...||.:||:|...|    .:|.:|   .|
Mouse   206 KSTFKMTYVEEISTKILLLPYVGNELNMIIMLPDEHVELSTVEKEITHEKFIEWTRLDRMKGEKV 270

  Fly   264 TLRLPKFKIEFFAQLNKVLVAMGIQDAFEKS-ADFKDLVENSNVHVKKVIHKAFIEVNEEGAEAA 327
            .:.||.||:|....:..||..:|:.||||:. |||..:.....:.:..||||:.:||||||:||.
Mouse   271 EVFLPWFKLEENYDMKDVLCKLGMTDAFEEGRADFSGISSKQGLFLSNVIHKSVVEVNEEGSEAT 335

  Fly   328 AATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKP 373
            |||.::....|...|    .|..:.||.:.|:..:|  |.|.|....|
Mouse   336 AATTIVLKGSSRSTP----CFCVNRPFIFFIQHIKTNEILFLGRLSSP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 125/371 (34%)
Serpinb6cNP_683744.2 serpin 2..379 CDD:476815 125/371 (34%)

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