DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and AT1G63280

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_176517.1 Gene:AT1G63280 / 842634 AraportID:AT1G63280 Length:120 Species:Arabidopsis thaliana


Alignment Length:115 Identity:35/115 - (30%)
Similarity:53/115 - (46%) Gaps:23/115 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 VNNWVDNQTRGKIKDLVSSNDMSKMELIVL--NAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPV 200
            :|.|..:.|.|.|.||:....: |.|.:.:  ||:||||.||.||:...||...|....:..|| 
plant    16 LNKWASDHTNGLIIDLLPRGSV-KSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGKEVHVP- 78

  Fly   201 EMMSLFQSFRAAHDSEL-----GAKIIELPYRNS------SLSMLIFLPD 239
                    |..:::|:.     |.|::.|||:..      ..|:..:|||
plant    79 --------FMRSYESQYIMACDGFKVLGLPYQQGLDDTKRKFSIYFYLPD 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 35/115 (30%)
AT1G63280NP_176517.1 serpin <5..>120 CDD:422956 33/113 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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