DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and SRP2

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:398 Identity:118/398 - (29%)
Similarity:187/398 - (46%) Gaps:69/398 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDDK 70
            |||:...:|.         :||.   :|.:.||.|:...|::.......||.:............
plant    43 LLLVGKVISA---------VAKN---SNCVFSPASINAVLTVTAANTDNKTLRSFILSFLKSSST 95

  Fly    71 KEVAAKYKDLLSKL--EGRE----KVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIV 129
            :|..|.:.:|.|.:  :|.|    |:|.:   |.:::.:.....|.:..:..:.|.|....:|. 
plant    96 EETNAIFHELASVVFKDGSETGGPKIAAV---NGVWMEQSLSCNPDWEDLFLNFFKASFAKVDF- 156

  Fly   130 DPNKASSI---VNNWVDNQTRGKIKDLVSSNDMSKM-ELIVLNAIYFKGQWEYKFNPKLTKKRNF 190
             .:||..:   ||.|....|...||:::....::.: ..|..||:||||.||..|:..:|:.:.|
plant   157 -RHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPF 220

  Fly   191 RVSDQKSVPVEMMSLFQ-SFRAAHDSELGAKIIELPYR------NSSLSMLIFLPDQVDGLSELE 248
            .:.:.|||.|..|..:: .|..|:|   |.|::.||||      |...||.::|||:...|..|.
plant   221 HLLNGKSVSVPFMRSYEKQFIEAYD---GFKVLRLPYRQGRDDTNREFSMYLYLPDKKGELDNLL 282

  Fly   249 KKIV---GFK----PKLSKMDV-TLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSN 305
            ::|.   ||.    |:. ::|| ..|:|||||||               .||.|:.|.|...|.:
plant   283 ERITSNPGFLDSHIPEY-RVDVGDFRIPKFKIEF---------------GFEASSVFNDFELNVS 331

  Fly   306 VHVKKVIHKAFIEVNEEGAEAAAATALLFVRYS-MPMPSSQMVFNADHPFAYVIRDRE--TIYFQ 367
            :|     .||.||::|||.||||||.::.|..| :..|..::.|.|||||.::||:.:  |:.|.
plant   332 LH-----QKALIEIDEEGTEAAAATTVVVVTGSCLWEPKKKIDFVADHPFLFLIREDKTGTLLFA 391

  Fly   368 GHFVKPNE 375
            |....|:|
plant   392 GQIFDPSE 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 113/383 (30%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 116/394 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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