DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and LOC569077

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_002665776.1 Gene:LOC569077 / 569077 -ID:- Length:491 Species:Danio rerio


Alignment Length:346 Identity:56/346 - (16%)
Similarity:103/346 - (29%) Gaps:147/346 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LKLPDDKKEVAAKYK--DLLSKLEG-------------------REKVATLSLANRIYVNK---- 103
            |.|.|...:|:..|.  |.:|..|.                   |:::..:||:|:..:.:    
Zfish   125 LTLDDPSVDVSVNYSDHDYVSTAESDALDLSLDHTDLRVEIANLRKQIEEISLSNKFCLERFAAS 189

  Fly   104 --------KF-----------QLVPSYNQMVKDS------------FMAEAEAIDIVD------- 130
                    :|           |:.|:..::|:.|            ..|.|.::..:|       
Zfish   190 DDDIRFYTRFASHGHLMAFWRQIEPATGKIVRVSRTQTAANPDEVPHTARATSLPPIDEFFLFMT 254

  Fly   131 ------------------PNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWE 177
                              .:..|.|:|.|                  :.....||..:   |.| 
Zfish   255 YLSLGLMQKDLAHRFRIHQSTVSRIINTW------------------ANFLYTVLGPV---GIW- 297

  Fly   178 YKFNPKLTKKRNFRVSDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVD 242
                           .|::.|...|..:||.:   .|:::.....||..:..| |:|:       
Zfish   298 ---------------LDEEMVKAHMPDVFQQY---SDTQVILDCTELRCQTQS-SLLL------- 336

  Fly   243 GLSELEKKIVGFKPKLSKMDVTLRLPKFKIEFFAQL-------NKVLVAMGIQDAFEKS----AD 296
             .||:   ...:||..:...:....|...:.|.:.|       .::|...||....:.:    .|
Zfish   337 -KSEV---FSSYKPHCTFKGLVGIAPHGAVTFISSLYEGAISDREILKQSGIVSLLKPTMAIMVD 397

  Fly   297 FKDLVEN---SNVHVKKVIHK 314
            ...|||:   ..||:...:.|
Zfish   398 KGFLVEDCVPCKVHIATFLSK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 56/346 (16%)
LOC569077XP_002665776.1 THAP 22..100 CDD:461662
HTH_Tnp_4 242..293 CDD:463934 7/68 (10%)
DDE_Tnp_4 321..477 CDD:463855 22/110 (20%)
Blue background indicates that the domain is not in the aligned region.

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