DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and serpind1

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:384 Identity:117/384 - (30%)
Similarity:198/384 - (51%) Gaps:36/384 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VSCRFADDFYQLLAKEN--AANNLISSPLSVEIALSMAYMGARAKTAQEM------RNVLKLPDD 69
            ::..|..:.|:.: |.|  |::|::.:|:.:..|::...:|.:.:...::      :|.:. ...
 Frog   115 INANFGFNLYRAI-KNNTDASDNILLAPVGISTAMATISLGTKGQALDQVLFTLGFKNFIN-ASS 177

  Fly    70 KKEVAA---KYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDP 131
            |.|:..   .::.|..:|..|....||...|.|||.|.|.:...:...:|:.:.|||:.:|....
 Frog   178 KYEILTLHNVFRKLTHRLFRRNFGYTLRSVNDIYVKKDFVIREPFKNNLKNYYFAEAQMVDFGSK 242

  Fly   132 NKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQK 196
            :..:. .|..:...|:|.||:.:::.|.:.:.|:| |.|||||.||.||..:.|:..|||:::::
 Frog   243 DFLTK-ANKRIQQLTKGLIKEALTNVDPALLMLLV-NCIYFKGTWENKFPVEYTQNMNFRLNEKE 305

  Fly   197 SVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFKPK---- 257
            .|.|.||....:|..|.|.||...:::||| ..::||||.||.::.|:..|||:|   .|:    
 Frog   306 LVKVPMMKTKGNFLVAADPELDCAVLQLPY-VGNISMLIVLPHKLSGMKLLEKQI---SPQVVER 366

  Fly   258 ----LSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIE 318
                ::.....:.||:||:|....|.:||..||:.|.| ...||.. |.:.|:::....|:..|.
 Frog   367 WQNIMTNRTREVFLPRFKLEKSYNLQEVLSNMGVTDLF-THGDFSG-VSDKNMNIGLFQHQGTIT 429

  Fly   319 VNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKPNE 375
            |||||.||||.|.:.|    ||: |:|..|.||.||.::|.:..|  :.|.|....|.:
 Frog   430 VNEEGTEAAAVTVVGF----MPL-STQARFVADRPFLFLIYEHRTNCLIFMGRVANPTK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 116/380 (31%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 117/384 (30%)

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