DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb3a

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_006249702.1 Gene:Serpinb3a / 498209 RGDID:1562868 Length:387 Species:Rattus norvegicus


Alignment Length:392 Identity:131/392 - (33%)
Similarity:217/392 - (55%) Gaps:34/392 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPD----- 68
            |....:.:|..:.|:.|  .::.:|:..||||:..||:|..:||:..|.:::..|::..:     
  Rat     3 LFAKATTQFTLELYRQL--RDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKVIQFHETTKKT 65

  Fly    69 --------DKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEA 125
                    |::.|..:::.|:::|........|:.||.||..|.|..:.::.:.:|:.:.|..|:
  Rat    66 TEKSADCHDEESVHEQFQKLMTQLNKSNDAYDLNSANSIYGAKHFPFLQTFLEDIKEYYQANVES 130

  Fly   126 IDIVD-PNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVL-NAIYFKGQWEYKFNPKLTKKR 188
            :|... ..::...:|:||:|||.||||||.....::...::|| ||:||||||.:||:.|.|::.
  Rat   131 LDFAHAAEESEKKINSWVENQTNGKIKDLFPKGSLNSSTILVLVNAVYFKGQWNHKFDEKHTEED 195

  Fly   189 NFRVSDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVG 253
            .|.::...|.||:||.....|......::.||::|:||:...|||.|.||.::|||.:||:::..
  Rat   196 KFWLNKNTSKPVQMMRQKNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEQLTA 260

  Fly   254 FK-------PKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFE-KSADFKDLVENSNVHVKK 310
            .|       ..::.:|:.|.||:||:|....|...|..||:.|||: |.|||..:.....:.|.|
  Rat   261 DKLLEWTRAENMNMIDLYLSLPRFKVEEKYDLPGPLQHMGMVDAFDSKKADFSGMSSTQGLMVSK 325

  Fly   311 VIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMV--FNADHPFAYVIRDRET--IYFQGHFV 371
            |:||:|:||||||.||||||.:     .:.:.|:|:.  ||.||||.::|:...|  |.|.|...
  Rat   326 VLHKSFVEVNEEGTEAAAATGV-----EVSLTSAQITEDFNCDHPFLFLIKHNATNSILFFGRMS 385

  Fly   372 KP 373
            .|
  Rat   386 SP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 129/387 (33%)
Serpinb3aXP_006249702.1 serpin 1..387 CDD:476815 130/390 (33%)

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