DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb3a

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_006249702.1 Gene:Serpinb3a / 498209 RGDID:1562868 Length:387 Species:Rattus norvegicus


Alignment Length:392 Identity:131/392 - (33%)
Similarity:217/392 - (55%) Gaps:34/392 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPD----- 68
            |....:.:|..:.|:.|  .::.:|:..||||:..||:|..:||:..|.:::..|::..:     
  Rat     3 LFAKATTQFTLELYRQL--RDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKVIQFHETTKKT 65

  Fly    69 --------DKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEA 125
                    |::.|..:::.|:::|........|:.||.||..|.|..:.::.:.:|:.:.|..|:
  Rat    66 TEKSADCHDEESVHEQFQKLMTQLNKSNDAYDLNSANSIYGAKHFPFLQTFLEDIKEYYQANVES 130

  Fly   126 IDIVD-PNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVL-NAIYFKGQWEYKFNPKLTKKR 188
            :|... ..::...:|:||:|||.||||||.....::...::|| ||:||||||.:||:.|.|::.
  Rat   131 LDFAHAAEESEKKINSWVENQTNGKIKDLFPKGSLNSSTILVLVNAVYFKGQWNHKFDEKHTEED 195

  Fly   189 NFRVSDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVG 253
            .|.::...|.||:||.....|......::.||::|:||:...|||.|.||.::|||.:||:::..
  Rat   196 KFWLNKNTSKPVQMMRQKNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEQLTA 260

  Fly   254 FK-------PKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFE-KSADFKDLVENSNVHVKK 310
            .|       ..::.:|:.|.||:||:|....|...|..||:.|||: |.|||..:.....:.|.|
  Rat   261 DKLLEWTRAENMNMIDLYLSLPRFKVEEKYDLPGPLQHMGMVDAFDSKKADFSGMSSTQGLMVSK 325

  Fly   311 VIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMV--FNADHPFAYVIRDRET--IYFQGHFV 371
            |:||:|:||||||.||||||.:     .:.:.|:|:.  ||.||||.::|:...|  |.|.|...
  Rat   326 VLHKSFVEVNEEGTEAAAATGV-----EVSLTSAQITEDFNCDHPFLFLIKHNATNSILFFGRMS 385

  Fly   372 KP 373
            .|
  Rat   386 SP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 129/382 (34%)
Serpinb3aXP_006249702.1 SERPIN 5..387 CDD:294093 129/388 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.830

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