DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn42Dd

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:382 Identity:182/382 - (47%)
Similarity:254/382 - (66%) Gaps:19/382 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKHLCLLLLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLK 65
            |.:||:.|..|||:|:.:.:.||||:|.:...||:.||:|:|..|||.:|||...||:|:::.|.
  Fly     1 MYYLCIFLWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALG 65

  Fly    66 LP-DDKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIV 129
            || :||:.|||:|..||:.|:|:|:...|.||||||||.::.|..:||..|::.|.:|||:|.:.
  Fly    66 LPSEDKEAVAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLT 130

  Fly   130 DPNKASSIVNNWVDNQTRGKIKDLVSSNDM-SKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVS 193
            :...|:..:|.||.:||.||||.::....| |.::.:::||||||||||.||:|..|:...|:|:
  Fly   131 NGPVAAERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVT 195

  Fly   194 DQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFKPKL 258
            ..|||||:||:...:|||.:..:|.|::|||||.||:|||.||||.:|:|||.||:|||||...|
  Fly   196 ANKSVPVQMMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVGFARPL 260

  Fly   259 SKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDL-VENSNVHVKKVIHKAFIEVNEE 322
            ...:|.|:||||||||..:|.:.|..:||::.|...:|...| .:.|...|.:|.||||:|||||
  Fly   261 VAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNEE 325

  Fly   323 GAEAAAATALL------FVRYSMPMPSSQMVFNADHPFAYVIRDRETIYFQGHFVKP 373
            |||||.||::.      |..:.|          ||||||:||||..||||||..|.|
  Fly   326 GAEAAGATSVAVTNRAGFSTFLM----------ADHPFAFVIRDANTIYFQGRVVSP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 173/364 (48%)
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 172/362 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468694
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
1110.900

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