DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn88Ea

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster


Alignment Length:396 Identity:113/396 - (28%)
Similarity:190/396 - (47%) Gaps:55/396 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL--PDDKKEVAAKYKD 79
            ||.....::.:.....|:..||.|...||.:||.|:...|.:|:..||.|  .|.|:.|.:.|  
  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEVVRSAY-- 105

  Fly    80 LLSKLEGREKVATLSL----ANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKAS-SIVN 139
            :|.|:..:|:.:.:.|    |:||:......:    .:..::....|.:.||.....:.| ..:|
  Fly   106 ILEKMNRKERQSKMPLEFSSADRIFFANDLHV----TECARNRLAEEVQQIDFKSQTEESRKQIN 166

  Fly   140 NWVDNQTRGKIKDLVSSNDMS-KMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMM 203
            :|:..||..:|::::|::::: :..|::.||.|.||||..:|..:.|....|..|......|.||
  Fly   167 DWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMM 231

  Fly   204 SLFQSFRAAHDSELGAKIIELPYR---------------NSSLSMLIFLPD-------------Q 240
            ....:|....|.:|.|.:::||||               ||.:||::.||.             .
  Fly   232 QQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLN 296

  Fly   241 VDGLSELEKKIVGFKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKS-ADFKDLVENS 304
            .|.|.:..|:.:   |:    ::.:.||||:.|...:||.:|..||:...|::| |.|.||. :.
  Fly   297 ADSLDDSLKQAM---PR----EIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLT-SE 353

  Fly   305 NVHVKKVIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDR--ETIYFQ 367
            .:.:....|.|.|:|:|||:.|||||.|...|.:.|:..::  |..:|||.:||.||  .:|.|.
  Fly   354 TISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAK--FECNHPFLFVIYDRTSRSILFT 416

  Fly   368 GHFVKP 373
            |.:..|
  Fly   417 GIYRDP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 112/391 (29%)
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 112/391 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446262
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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