DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn55B

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster


Alignment Length:365 Identity:129/365 - (35%)
Similarity:214/365 - (58%) Gaps:14/365 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDD-KKEVAAKYKD 79
            ||..:.:|||:......|::.||.|::..:::|:.|::.:||.|:...|....: ..|||..::.
  Fly    14 RFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQTFQF 78

  Fly    80 LLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKASSIVNNWVDN 144
            :|.|.....   .|.:||::||.:..||.|:|...:|:.:.:|||:|:....:.|:..:|.||:.
  Fly    79 VLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAWVNA 140

  Fly   145 QTRGKIKDLVSSNDMS-KMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMMSLFQS 208
            :|:|||.:|||::..| ...|::|||::|||.|.:||:.:.|::..|.|.:::.|.:..|:....
  Fly   141 KTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAK 205

  Fly   209 FRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKK-----IVGFKPKLSKMDVTLRLP 268
            |......:||...:|:||::|.|||.:.||.:..|:..|.:|     :|....||:..:|.::.|
  Fly   206 FNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVHVKFP 270

  Fly   269 KFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVEN-SNVHVKKVIHKAFIEVNEEGAEAAAATAL 332
            |||:::..:|.:.|..:||...|...|:|.:|:|: ..|.|.||:|||.|||||||.||||||.:
  Fly   271 KFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGM 335

  Fly   333 LFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYFQGHFVK 372
            :.:...|..|   :.|.||.||.|||.:::.|.|.|.|||
  Fly   336 IMMTRMMTFP---LQFQADRPFLYVIWNKKNILFAGAFVK 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 129/365 (35%)
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 124/358 (35%)

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