DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and serpina3

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:383 Identity:115/383 - (30%)
Similarity:202/383 - (52%) Gaps:30/383 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVSCRFADDFYQLLA------KENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL---- 66
            |.:..||.:.|:.|.      ||:...|::.||||:..|.||..:||::::.|::.:.|.|    
 Frog    42 SANIDFALNLYKHLVTKTQAEKESTQKNIVFSPLSILTAFSMLLLGAKSESHQQILSGLSLNQTQ 106

  Fly    67 -PDDKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVD 130
             |::....|  ::.||..|...:....:.:.|.::|....:::.|:.|.::..:.||.......:
 Frog   107 VPEEDMHEA--FEHLLQVLNRPKSDLQVKIGNAVFVEDTLKILDSFVQEIEHHYHAEIFPSHFKN 169

  Fly   131 PNKASSIVNNWVDNQTRGKIKDLVSSNDMSK-MELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSD 194
            |.:|...:|::|:|:|.|:|::||  .|:|: .:|:|:|.|.|..:|:..|:...|..|.|.|.:
 Frog   170 PAEAEKQINDFVNNKTEGRIQELV--KDLSEATKLVVINFILFNAEWQNPFSSFFTHSRQFSVDE 232

  Fly   195 QKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELE-----KKIVGF 254
            ..:|.|:|||....::...|.::...:::|||:|:: ||||.:| ::..:.|:|     :.:..:
 Frog   233 NTTVEVQMMSKTDLYQFYKDEKIPCSVLQLPYKNNA-SMLIIVP-ELGKIHEVEEALSVETLKRW 295

  Fly   255 KPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEV 319
            .....|....|.||||.|....:|..:|..||:...|..:|||..:.|||.:.:.||:|||.:.|
 Frog   296 TSSAEKSFFELFLPKFSISSSLKLKDILTDMGMGIIFTDAADFSGISENSRLKLSKVVHKAVLNV 360

  Fly   320 NEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRE--TIYFQGHFVKPNE 375
            .|.|.|||||:|:..|     :.|..:.|..|.||..:|..:|  :|.|....:.|.|
 Frog   361 AENGTEAAAASAVEGV-----LTSLMVQFVVDKPFITLICSQEPYSILFMSRVIDPTE 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 113/379 (30%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 112/378 (30%)

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