DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and serpina3k

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_002936116.2 Gene:serpina3k / 496632 XenbaseID:XB-GENE-6453500 Length:432 Species:Xenopus tropicalis


Alignment Length:383 Identity:112/383 - (29%)
Similarity:192/383 - (50%) Gaps:24/383 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CLLLLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDD 69
            ||.:  ...:..|....|:.:|.::...|:..||:|:....:|..:|||:.|..::...||....
 Frog    62 CLKI--APYNANFGFSLYRQIAADHPTENIFISPVSISTVFAMLSLGARSNTLNQIIEGLKFNRS 124

  Fly    70 ---KKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDP 131
               ::|:...::.||..|........|:..|.::::|..||:..:.:..|..:.||..:.|..:.
 Frog   125 ELTEEEMHKGFQHLLHMLNDPNSKVQLNSGNALFIDKDLQLIQKFVEDSKQFYEAETFSTDFHNT 189

  Fly   132 NKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQK 196
            .:|:..:|.:.:|:|:|||.||:||.| .|..|:::|.|||.|:||..|..:.||...|.|.:..
 Frog   190 EEATKQINTYAENKTKGKITDLISSVD-EKTILVLINYIYFYGEWEKHFEKEWTKDGIFHVDENT 253

  Fly   197 SVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPD-----QVDGLSELEKKIV-GFK 255
            :|.|.||.....:..|.|.:||..::::||:.::.::.| |||     ||:  ..|||.:| .:|
 Frog   254 NVTVPMMHRNGMYNVAFDEKLGCTVVQIPYKGNATALFI-LPDEGKLRQVE--EALEKAVVKSWK 315

  Fly   256 PKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEVN 320
            ....|..|.|.|||..|.....|.|.|..:|:.|.|..::|...:|:.:.:.|.|.:||..:.::
 Frog   316 KLFRKRFVHLTLPKLSISATTDLVKELSKLGVTDVFSDNSDLSGIVDVTPLKVSKAVHKVLVSID 380

  Fly   321 EEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRD---RETIYFQGHFVKPNE 375
            |.|.|||..|.:..|...:|   .::.:|  .||..:|.:   |..: |.|..:.|.|
 Frog   381 ETGTEAAGVTVMEIVPTMLP---PRIEYN--RPFVLMIYEPTLRANL-FMGRVMNPKE 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 108/372 (29%)
serpina3kXP_002936116.2 serpin 62..431 CDD:476815 110/380 (29%)

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