DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and serpinb6

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001007932.1 Gene:serpinb6 / 493311 XenbaseID:XB-GENE-1001870 Length:379 Species:Xenopus tropicalis


Alignment Length:378 Identity:141/378 - (37%)
Similarity:216/378 - (57%) Gaps:30/378 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDDKKEVAAKYKDLL 81
            ||.:|.:.:.:.|...|:..||||:..||||..:||:..||.:|..|||| |...:....::.|:
 Frog    11 FAINFLKKINESNKTGNIFVSPLSISSALSMVLLGAKGNTATQMSQVLKL-DKVDDAHCNFQSLI 74

  Fly    82 SKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKASSI---VNNWVD 143
            |::........|..|||:|..|.:..:..:....:..:.|:.:|:|.  ..||...   :|.||.
 Frog    75 SEINKSGTNYLLRTANRLYGEKSYTFLEEFLGSTQKHYHADLKAVDF--SRKAEESRGEINEWVA 137

  Fly   144 NQTRGKIKDLVSSNDMSKM-ELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMMSLFQ 207
            .:|.||||||:||..:..: .|:::|||||||.|..||||..|.:..||::..::.||:||....
 Frog   138 QKTEGKIKDLLSSGSVDSLTRLVLVNAIYFKGNWANKFNPDHTHESPFRLNKNETKPVQMMFKKA 202

  Fly   208 SFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVD----GLSELEKKIVGFK------PKLSKMD 262
            .|...:..||..|::|:||.::.|||:|.|||.::    ||..|||::...|      |::  ||
 Frog   203 KFPMTYIGELFTKVVEIPYVDNELSMIILLPDDINDGTTGLEALEKELTYEKFLKWTNPEM--MD 265

  Fly   263 VT---LRLPKFKIEFFAQLNKVLVAMGIQDAF-EKSADFKDLVENSNVHVKKVIHKAFIEVNEEG 323
            :|   |.|||||:|....|...|..||:.||| ::.|||..:...:::.:.||:||:|::|||||
 Frog   266 ITEMELSLPKFKLEDDYDLESFLSTMGMSDAFDQRRADFSGMSSANDLFLSKVLHKSFVDVNEEG 330

  Fly   324 AEAAAAT-ALLFVRYSMPMPSSQMVFNADHPFAYVI--RDRETIYFQGHFVKP 373
            .|||||| |::.:|.:|.:|  ::|  .||||.:.|  |..::|.|.|.|..|
 Frog   331 TEAAAATAAIMMLRCAMIIP--RIV--CDHPFLFFILHRPSQSILFCGRFALP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 139/373 (37%)
serpinb6NP_001007932.1 PAI-2 4..379 CDD:239013 140/376 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 227 1.000 Domainoid score I2443
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 227 1.000 Inparanoid score I3392
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm9399
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.980

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