DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and nec

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster


Alignment Length:376 Identity:118/376 - (31%)
Similarity:205/376 - (54%) Gaps:31/376 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEM-------RNVLKLPDDKKEV 73
            ||:.:.::.:.|..:..|::.||.||...|::.|..:..||.:|:       :|.:.:..|.:.|
  Fly   109 RFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESV 173

  Fly    74 AAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLV-PSYNQMVKDSFMAEAEAIDIVDPNKASSI 137
             .|||   ..|||    |.|:||.::|.|::...| .||::..|..|.|..||:|:.:....::.
  Fly   174 -IKYK---KHLEG----ADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAK 230

  Fly   138 VNNWVDNQTRGKIKDLVSSNDMS-KMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVE 201
            :|.||.:.||.||:|||:..|:. :.:.:::||:||:|:||::|....|...:|:.::.:...|.
  Fly   231 INAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVA 295

  Fly   202 MMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFKP---------K 257
            ||.....:..|...||||..:||.|::|:.||||.||::..||.::.:::  .:|         :
  Fly   296 MMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQL--SRPEFDLNRVAHR 358

  Fly   258 LSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEVNEE 322
            |.:..|.:|||||:.||...:.:.|..:|:...|..::....|::.. |.|.|::.||:|.|.|.
  Fly   359 LRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQP-VRVSKILQKAYINVGEA 422

  Fly   323 GAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYFQGHFVKP 373
            |.||:||:...||..|:|...::.|  |:.||.:.:|...::.|.||...|
  Fly   423 GTEASAASYAKFVPLSLPPKPTEFV--ANRPFVFAVRTPASVLFIGHVEYP 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 116/371 (31%)
necNP_524851.1 SERPIN 108..468 CDD:238101 116/371 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446353
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
87.850

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