DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn43Aa

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster


Alignment Length:395 Identity:137/395 - (34%)
Similarity:210/395 - (53%) Gaps:29/395 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKH-LCLLLLATSVSC------------RFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGA 52
            |.| |.::||...:|.            .||.:.:|.||.:....|:|.||:|:::||.:||.||
  Fly     1 MNHWLSIILLGVWISAPEGLGNTIKDRNLFATELFQTLATDRQDENVIISPVSIQLALGLAYYGA 65

  Fly    53 RAKTAQEMRNVL--KLPDDKKEVAAKYKDLL-SKLEGREKVATLSLANRIYVNKKFQLVPSYNQM 114
            ..:||.|::..|  ...:.|..:|..|.:|| |.::.:   ..|.:||::|..:...:...:.::
  Fly    66 EGRTAAELQKTLHASAKESKDGLAESYHNLLHSYIKSK---TVLEIANKVYTRQNLTVSSHFREV 127

  Fly   115 VKDSFMAEAEAIDIVDPNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYK 179
            .:..|.:|.|.:|.....:|...:|.||..||..||:.:|.|.: ....:.::||||||.:|...
  Fly   128 AQKYFDSEVEPLDFSRETEAVEQINRWVKQQTENKIERVVESLE-PDTNVALVNAIYFKARWARP 191

  Fly   180 FNPKLTKKRNFRVSDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGL 244
            ||.:.|:.|.|.:|:.:|:.|..|.....:..|...||.||.|||.:.|.:|:|...||:|..||
  Fly   192 FNDEDTRDREFWLSESRSIQVPTMFADNWYYYADYPELDAKAIELFFENINLTMWFILPNQRSGL 256

  Fly   245 SELEKKIVG-----FKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENS 304
            ..||:|:.|     .:.:.....|::.|||||.||...|...|..|||...|..:|||.::.::|
  Fly   257 QALEQKLKGVDFNLLEDRWQWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDS 321

  Fly   305 NV--HVKKVIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYFQ 367
            .:  .:.||.||.||:|||.|.|||.|:....|..|:|:  ....|.||||||::|||:..:||.
  Fly   322 PIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPL--DPKTFVADHPFAFIIRDKHAVYFT 384

  Fly   368 GHFVK 372
            ||.||
  Fly   385 GHIVK 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 129/377 (34%)
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 128/364 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446349
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
109.900

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