DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn43Ab

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster


Alignment Length:393 Identity:118/393 - (30%)
Similarity:199/393 - (50%) Gaps:41/393 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CLLLLATSVSCR-------------FADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKT 56
            |||||..:||..             .|.|.|..:|.::...|::.||.:::.::::|::||:.:|
  Fly     7 CLLLLLATVSQSKTVGYDAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQT 71

  Fly    57 AQEMRNVLKL-PDDKKEVAAK---YKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKD 117
            |.|::..|:| |.|...|:.:   |:..|::..      ...|||.||:|:..:...|:..:.:.
  Fly    72 ASELQQGLRLGPGDADAVSQRSGSYQQALTRDN------NFRLANNIYINENLEFKGSFRDVAQR 130

  Fly   118 SFMAEAEAIDIVDP-NKASSI-VNNWVDNQTRGKIKDLVSS---NDMSKMELIVLNAIYFKGQWE 177
            .|.:..:.:|...| ||.::. :|..|..:|.|||.|::.:   ||  :.|.:::|.:.:...|:
  Fly   131 QFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILRAELLND--RTEGVIVNGVSYSAAWQ 193

  Fly   178 YKFNPKLTKKRNFRVSDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVD 242
            ..|....|:||:||....:||.|:.|...|:|..|..:.|.||::||||:|...|||:.||::.|
  Fly   194 KAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRKD 258

  Fly   243 GLSELEKKIVGFK-----PKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVE 302
            ||..|::.:.|..     ..:|:..|.:.||||.:.|...|......:|:...|.:..||.::..
  Fly   259 GLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYR 323

  Fly   303 NSNVH-VKKVIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYF 366
            ....| :..|.|||.:||.|.|.:....|.||     ..:.|....|.|||||.:.|:.:::|.|
  Fly   324 MFVSHFINAVEHKANVEVTEAGVDQPLETGLL-----KGLFSRSKKFEADHPFVFAIKYKDSIAF 383

  Fly   367 QGH 369
            .||
  Fly   384 IGH 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 112/384 (29%)
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 111/370 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446350
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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